Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00409 and BL02542

See DNA alignment / Visit BSNT_00409 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00409___psd.1.5803.seq
#    -bsequence pep-align/BL02542___psd.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00409___psd-BL02542___psd.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00409___psd-BL02542___psd.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00409___psd
# 2: BL02542___psd
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     115/267 (43.1%)
# Similarity:   164/267 (61.4%)
# Gaps:           8/267 ( 3.0%)
# Score: 564.0
# 
#
#=======================================

BSNT_00409___      1 MFNTAVKILYRSLIELTNHRLSSYLIKGFCESKISKPVIPLFSKHFRLNW     50
                         ..|.|||.||||||.:..|.:::.|.:||:|||:||.:.|.|.:|.
BL02542___psd      1 ----MKKRLYRFLIELTNKKGVSRMLEKFAQSKLSKPLIPSYIKTFHINT     46

BSNT_00409___     51 DDVDGTAADYGSLSELFIRQINLERRPVSKEAHAVVSPVDGVVQTVGIIN    100
                     :::......:.||.|||||::....||:..:.:::|||||||::.:|.|.
BL02542___psd     47 EEMLEDVRSFNSLHELFIRKLKSGARPLPADPNSLVSPVDGVIEEMGTIT     96

BSNT_00409___    101 PNQTFTVKGKDYSFAELTGCKSADHQYNGGYFVVLYLSPRHYHRFHSPIS    150
                     .::.||||.|.||..|:.|.....::|.||.::::|||||.|||.|||..
BL02542___psd     97 RDKQFTVKQKLYSVEEMIGRSEIVNRYVGGTYIIIYLSPRDYHRIHSPAY    146

BSNT_00409___    151 CRYQKLAELGNRSYPVNQLGLKYGKDVLSKNYRFVYELNSGSRNVLMIPV    200
                     ...:....||:.|||||::||.|||..|:||||.:.|......:.|::.|
BL02542___psd    147 GTLETQYSLGSTSYPVNKIGLTYGKSPLTKNYRMISEFKHQYGSALLVKV    196

BSNT_00409___    201 GAMNINSIVQTNTRTELEIGEELGYFSFGSTVILIFEKDAFQPSAHLAEG    250
                     |||.|||||......|...|:|:.||||||||||:||||.|.|...|...
BL02542___psd    197 GAMYINSIVMLQESKEWRRGDEIAYFSFGSTVILLFEKDTFIPDERLHPS    246

BSNT_00409___    251 QEVQVGELIGYEE----    263
                     .:|::||::|...    
BL02542___psd    247 LQVKMGEVLGSLAKRTS    263


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