Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00959 and BL02590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_00959.1.5803.seq
# -bsequence pep-align/BL02590___ydfR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00959-BL02590___ydfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00959-BL02590___ydfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00959
# 2: BL02590___ydfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 51/193 (26.4%)
# Similarity: 72/193 (37.3%)
# Gaps: 87/193 (45.1%)
# Score: 248.0
#
#
#=======================================
BSNT_00959 0 -------------------------------------------------- 0
BL02590___ydf 1 MAFVLETLFLILTGIVLLRISGRKSISQMTIATTVVMISIGTIIVQPIIE 50
BSNT_00959 1 --------------------------------MLTGEAKVVIENGQLHIE 18
::.|:|.|:||||:|..:
BL02590___ydf 51 DSIFKTVAAASIFIIVLLLIEYLKMKFDFFESLIAGKAVVLIENGELQEQ 100
BSNT_00959 19 NLKKMRLTVDQLEMQLRLHGVTGIQDVKIATLEANGQLGIELTDDAKPLT 68
||||.|||||||||:||..|::.:.|||..|||:|||:|.||:|||||.|
BL02590___ydf 101 NLKKHRLTVDQLEMRLRTQGISKLADVKNVTLESNGQIGYELSDDAKPFT 150
BSNT_00959 69 VRDLKKLIHPDFINKDGQAQSGNQNIFDEVGKKNKKNVPKKLH 111
:.:.|| |:......|....|:|.|:.:.:.....|:|.
BL02590___ydf 151 MGEYKK-----FLRMQNNLQQPEDNLFKEITEGHLNEPDKQLR 188
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