Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04625 and BL02593

See DNA alignment / Visit BSNT_04625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence pep-align/BSNT_04625___gspM.1.5803.seq
#    -bsequence pep-align/BL02593___yugI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04625___gspM-BL02593___yugI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04625___gspM-BL02593___yugI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04625___gspM
# 2: BL02593___yugI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     116/130 (89.2%)
# Similarity:   123/130 (94.6%)
# Gaps:           1/130 ( 0.8%)
# Score: 585.0
# 
#
#=======================================

BSNT_04625___      1 MAAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINE     50
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BL02593___yug      1 MTAKFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINE     50

BSNT_04625___     51 HLSVGDEVQVKVLAVDEEKGKISLSIRATQAAPEKKESKPRKPKAAQVSE    100
                     ||:||||||||||:||||||||||||||||||||:||||||:.||.| :|
BL02593___yug     51 HLAVGDEVQVKVLSVDEEKGKISLSIRATQAAPERKESKPRRQKAVQ-AE     99

BSNT_04625___    101 EASTPQGFNTLKDKLEEWIEMSNRKDLIKK    130
                     :.:.||||||||||||||||.|||||||||
BL02593___yug    100 DTAAPQGFNTLKDKLEEWIEQSNRKDLIKK    129


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.