Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03368 and BL02772
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence pep-align/BSNT_03368___trpF.1.5803.seq
# -bsequence pep-align/BL02772___trpF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03368___trpF-BL02772___trpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03368___trpF-BL02772___trpF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03368___trpF
# 2: BL02772___trpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 134/218 (61.5%)
# Similarity: 162/218 (74.3%)
# Gaps: 3/218 ( 1.4%)
# Score: 666.5
#
#
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BSNT_03368___ 1 MKKPALKYCGIRSLKDLQLAAESQADYLGFIFAESKRKVSPEDVKKWLNQ 50
||||:||||||.||:||::.|.|:|||||||||||||.|.|.|||:|..:
BL02772___trp 1 MKKPSLKYCGIHSLEDLKVTARSKADYLGFIFAESKRSVDPADVKRWCGE 50
BSNT_03368___ 51 ARVE-KQVAGVFDNESIETMSRIAKSLKLDVIQLHGDEKPADAAALRKLT 99
.... |::.|||.||::..|:.|.|...||||||||||..||...|:.:|
BL02772___trp 51 TDTPGKKLVGVFVNENMSRMAEIVKDAGLDVIQLHGDETAADIKRLKSMT 100
BSNT_03368___ 100 GCEIWKALHHQDNTTQEIARFKDNVDGFVIDSSVKGSRGGTGVAFSWECV 149
.|||||||.|.::|.|.:|.|...:||:||||||||.||||||:|||:.|
BL02772___trp 101 DCEIWKALPHGNDTVQSMASFAPYIDGYVIDSSVKGMRGGTGVSFSWDSV 150
BSNT_03368___ 150 PEYQQAA--IGKRCFIAGGVNPDSITGLLKWQPEGIDLASGIEKNGQKDQ 197
|.|..|| .|||.|||||||||:|..|||.:|.|||||||||:.|:|.:
BL02772___trp 151 PLYIDAAQREGKRLFIAGGVNPDTIADLLKRRPPGIDLASGIEERGRKSE 200
BSNT_03368___ 198 NLMSLLEERMNRYVSISE 215
.|:|||||||..:|.|||
BL02772___trp 201 KLISLLEERMFEHVFISE 218
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