Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00714 and BL02808

See DNA alignment / Visit BSNT_00714 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_00714___ycsI.1.5803.seq
#    -bsequence pep-align/BL02808___ycsI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00714___ycsI-BL02808___ycsI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00714___ycsI-BL02808___ycsI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00714___ycsI
# 2: BL02808___ycsI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     194/263 (73.8%)
# Similarity:   228/263 (86.7%)
# Gaps:           1/263 ( 0.4%)
# Score: 1079.0
# 
#
#=======================================

BSNT_00714___      1 MEQLNKMAPKDVRALIREGKINGPTAGMSGGYAQANLVVLKKDLAFDFLL     50
                      ..:|:|.|.:||||||:|:|.||||||:||:.|||||:|||:|||:|||
BL02808___ycs      1 -MHVNEMRPDEVRALIRKGEITGPTAGMAGGFTQANLVILKKELAFEFLL     49

BSNT_00714___     51 FCQRNQKPCPVLDVTEAGSPVPSLAAPDADIRTDFPKYRIYRHGILTEEV    100
                     ||||||||||:||||:.||||||:.||||||||||||||:|:.|.|.:||
BL02808___ycs     50 FCQRNQKPCPILDVTDPGSPVPSITAPDADIRTDFPKYRVYKRGELADEV     99

BSNT_00714___    101 SDITPYWEDDFVGFLIGCSFSFEQALINNGIAVRHIDEGTNVSMYKTNID    150
                     :||:..||||.|||||||||:|||||:||||.||||:|..||.||:|||.
BL02808___ycs    100 TDISSLWEDDMVGFLIGCSFTFEQALMNNGIPVRHIEEKRNVPMYQTNIP    149

BSNT_00714___    151 CVPAGAFHGQMVVSMRPVPERLAVRAAQVTSRFPAVHGGPIHIGNPGAIG    200
                     |||||.|.|.||||||||||..||||.|||||.|||||||:|||:|.|||
BL02808___ycs    150 CVPAGRFQGPMVVSMRPVPEEQAVRAVQVTSRLPAVHGGPVHIGSPEAIG    199

BSNT_00714___    201 IRDLGKPDFGDAVSIRDGEVPVFWACGVTPQAVAMNVKPEMVITHAPGHM    250
                     |.|:.||||||||:|:.||||||||||||||||||:.:||::|||:||||
BL02808___ycs    200 ITDIAKPDFGDAVTIKKGEVPVFWACGVTPQAVAMHARPELMITHSPGHM    249

BSNT_00714___    251 LITDIRDESLAVL    263
                     |:||:|||...||
BL02808___ycs    250 LVTDVRDEQFGVL    262


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