Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05943 and BL02833
See
DNA alignment /
Visit
BSNT_05943 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:01
# Commandline: needle
# -asequence pep-align/BSNT_05943___msmX.1.5803.seq
# -bsequence pep-align/BL02833___msmX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05943___msmX-BL02833___msmX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05943___msmX-BL02833___msmX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05943___msmX
# 2: BL02833___msmX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 280/368 (76.1%)
# Similarity: 317/368 (86.1%)
# Gaps: 3/368 ( 0.8%)
# Score: 1465.0
#
#
#=======================================
BSNT_05943___ 1 MAELRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMV 50
||||.::.|||.||.|..|||:|||||.|||||||||||||||||||||:
BL02833___msm 1 MAELVLDRIYKVYDNKVTAVDNFNLHIEDKEFIVFVGPSGCGKSTTLRMI 50
BSNT_05943___ 51 AGLEEISKGDFYIEGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFG 100
||||||:.|:|.|:|||:|||||||||||||||||||||||.||||:|||
BL02833___msm 51 AGLEEITDGEFTIDGKRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAFG 100
BSNT_05943___ 101 LKLRKMPKPEIKKRVEEAAKILGLEEYLHRKPKALSGGQRQRVALGRAIV 150
|||||.||.|||:||.|||||||||:||.|||||||||||||||||||||
BL02833___msm 101 LKLRKFPKDEIKRRVHEAAKILGLEQYLDRKPKALSGGQRQRVALGRAIV 150
BSNT_05943___ 151 RDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQRLQTTTIYVTHDQTEALT 200
|||||||||||||||||||||||||||.||||||||||||||||||||:|
BL02833___msm 151 RDAKVFLMDEPLSNLDAKLRVQMRAEITKLHQRLQTTTIYVTHDQTEAMT 200
BSNT_05943___ 201 MATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAMNFFKGKLTDG 250
||||:||||||.|||:|.||:|||.||||||||||||||||||.|.|.:.
BL02833___msm 201 MATRLVVMKDGIIQQVGAPKEVYENPENVFVGGFIGSPAMNFFTGTLKED 250
BSNT_05943___ 251 LIKIGSAALTVPEGKMKVLREKGYIGKEVIFGIRPEDIHDELIVVESYKN 300
:......::.||||||||||.:||:|||:|.||||||||||.:.:|:.|:
BL02833___msm 251 MFTFDGVSVRVPEGKMKVLRGQGYVGKEIIMGIRPEDIHDEPVFIEASKD 300
BSNT_05943___ 301 SSIKAKINVAELLGSEIMIYSQIDNQDFIARIDARLDIQSGDELTVAFDM 350
|.:.|||.||||:|:|.|:|||...|.||||:|:|.|:|:||.:.:|.||
BL02833___msm 301 SKVDAKIEVAELMGAETMLYSQAGTQPFIARVDSRTDVQAGDTIPLALDM 350
BSNT_05943___ 351 NKGHFFDSETEVRIR--- 365
||.||||.|||:|||
BL02833___msm 351 NKAHFFDKETELRIRSEG 368
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.