Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04696 and BL03008
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence pep-align/BSNT_04696___yukF.1.5803.seq
# -bsequence pep-align/BL03008___yukF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04696___yukF-BL03008___yukF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04696___yukF-BL03008___yukF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04696___yukF
# 2: BL03008___yukF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 296/412 (71.8%)
# Similarity: 355/412 (86.2%)
# Gaps: 5/412 ( 1.2%)
# Score: 1557.0
#
#
#=======================================
BSNT_04696___ 1 --MPNDPFKYSFDRLEDVADHISDVLRCPITIEDVNHKLLAYSTHSDCTD 48
..|:||||.:|||||||||||:||.|||||||:||:|||||||||.||
BL03008___yuk 1 MNNRNNPFKYQYDRLEDVADHISEVLDCPITIEDINHRLLAYSTHSDYTD 50
BSNT_04696___ 49 PARTSTIIGRRVPEKVINKLWKDGTIPALLKTDQPIRVKQIDEVGLSNRV 98
|||||||||||||||||||||||||||||:|||:||||:||||||||:||
BL03008___yuk 51 PARTSTIIGRRVPEKVINKLWKDGTIPALMKTDEPIRVEQIDEVGLSSRV 100
BSNT_04696___ 99 AISIWKNKQVLGFIWALEIQKTLSDEDLLTLQMAAKAVKNKLLKLQIRKT 148
|||||||.:|:|||||||.|||||:::|..|::||.:||||||..|:||.
BL03008___yuk 101 AISIWKNSEVIGFIWALESQKTLSEDELHLLKLAADSVKNKLLPYQVRKR 150
BSNT_04696___ 149 KNEERSQEFFWKMLTGHIHQEDDMADGFHKLGMAAPSEFSVMIIRINGEL 198
|||:||||||||:|||||.::.:::||||:||:..||.:||:|||:..|:
BL03008___yuk 151 KNEQRSQEFFWKLLTGHISEDQEISDGFHQLGIGVPSTYSVIIIRLKDEI 200
BSNT_04696___ 199 TEKIEQQLQYLQETTQQVYVLLATVDSNELIILTSPKT---DHPFQDLKQ 245
.||.|:||.||.|||||:.:||||:|.||||:|.|||| ..||.||||
BL03008___yuk 201 EEKTEKQLHYLLETTQQLQILLATIDYNELIVLASPKTGQKGQPFNDLKQ 250
BSNT_04696___ 246 FALSTQKQLKERYKIEDVSIAFGGIYNSISFVSRSYQEALSVLKTKERFA 295
||.:.||||:||||:.:.:||.||:|:.|:.|.:|||||||.||.||||.
BL03008___yuk 251 FAANIQKQLEERYKLNNCTIAIGGMYSLITLVHQSYQEALSALKVKERFP 300
BSNT_04696___ 296 EETKHFFSFSELGIYQYLDVLNEKRKQAGHYNYSLSKLEQYDRDHQSNLV 345
:||:|..||||||||||||||:||||.|.:.||||.:||.||::|.||||
BL03008___yuk 301 DETRHLVSFSELGIYQYLDVLSEKRKHASYPNYSLMQLEAYDKEHHSNLV 350
BSNT_04696___ 346 ETLERFIEADSNVNTASKLLNIHVNTLNYRLKRISQIAEIDLKNVNQKFT 395
||||:|||.|||||||:|.||||||||||||||||:||||||||:|:|||
BL03008___yuk 351 ETLEQFIECDSNVNTAAKKLNIHVNTLNYRLKRISKIAEIDLKNINEKFT 400
BSNT_04696___ 396 IYLDIKLRHMDL 407
|||:||||:|.|
BL03008___yuk 401 IYLEIKLRNMHL 412
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