Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00602 and BL03096

See DNA alignment / Visit BSNT_00602 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:13
# Commandline: needle
#    -asequence pep-align/BSNT_00602___yckD.1.5803.seq
#    -bsequence pep-align/BL03096___yckD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00602___yckD-BL03096___yckD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00602___yckD-BL03096___yckD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00602___yckD
# 2: BL03096___yckD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      39/112 (34.8%)
# Similarity:    68/112 (60.7%)
# Gaps:           8/112 ( 7.1%)
# Score: 204.5
# 
#
#=======================================

BSNT_00602___      1 MKRITINIITMFIATTVISLTGTAEAAEKQQQPPANVTLTDQQKKEVEQL     50
                     |:::.:.::      .||.|:.||.......:......|||:||.|:..|
BL03096___yck      1 MRKLCVCLL------LVIPLSCTAVMPSAYGETRVYQELTDKQKNELASL     44

BSNT_00602___     51 EAEILKKRKDVISKYVQYGVLPKERGEHIKNHLDKHFEMMKQNGFVPKHH    100
                     :.:|::|:|.:|:|||:||:|.:|||:.||:|::|.:|..:::||:||..
BL03096___yck     45 QKDIMEKKKQLINKYVEYGILDQERGKEIKSHIEKRYEKEREDGFLPKWK     94

BSNT_00602___    101 PHPHKFEKRH--    110
                     .|..||...|  
BL03096___yck     95 HHKEKFRPHHIH    106


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