Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03114 and BL03129

See DNA alignment / Visit BSNT_03114 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_03114___yozA.1.5803.seq
#    -bsequence pep-align/BL03129.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03114___yozA-BL03129.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03114___yozA-BL03129.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03114___yozA
# 2: BL03129
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      91/110 (82.7%)
# Similarity:   101/110 (91.8%)
# Gaps:           3/110 ( 2.7%)
# Score: 440.5
# 
#
#=======================================

BSNT_03114___      1 MTEF-RET--EQSAADLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHA     47
                     |:|. :||  :|..|:|||||||||:||||||||||||:||||||||||:
BL03129            1 MSEHNQETTEKQVRAELDEETLFLVSQTFKALSDPTRIKILHLLSQGEHS     50

BSNT_03114___     48 VNGIAEKLNLLQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVL     97
                     ||.|||||:|||||||||||||||||||||||.||||:|||||:||||||
BL03129           51 VNEIAEKLSLLQSTVSHQLRFLKNLRLVKSRRAGTSIFYSPEDQHVLDVL    100

BSNT_03114___     98 QQMIHHTQHD    107
                     ||||.|||||
BL03129          101 QQMIDHTQHD    110


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.