Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05362 and BL03390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence pep-align/BSNT_05362___yvjB.1.5803.seq
# -bsequence pep-align/BL03390___ctpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05362___yvjB-BL03390___ctpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05362___yvjB-BL03390___ctpB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05362___yvjB
# 2: BL03390___ctpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity: 361/484 (74.6%)
# Similarity: 411/484 (84.9%)
# Gaps: 9/484 ( 1.9%)
# Score: 1801.5
#
#
#=======================================
BSNT_05362___ 1 MNQKIMAVIAAGSMLFG---GAGVYAGINLLEMDKPQTAAVPATAQADSE 47
|||||:.:|.|.|:|.| ||| .|.|.::....:||..|.|::.:.
BL03390___ctp 1 MNQKIVRLIIALSLLCGLVTGAG---PIPLHDVVSKASAAEEAAAKSTAR 47
BSNT_05362___ 48 RDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDK 97
.: ::||||||:||||||||:||||||||||||||||||||||||||||
BL03390___ctp 48 NE--LEKIEKAYDLISNEYVEQVDREKLLEGAIQGMLSTLNDPYSVYMDK 95
BSNT_05362___ 98 QTAKQFSDSLDSSFEGIGAEVGMEDGKIIIVSPFKKSPAEKAGLKPNDEI 147
||||:|||||||||||||||:||||.|||||||||:||||||||||||||
BL03390___ctp 96 QTAKRFSDSLDSSFEGIGAEIGMEDRKIIIVSPFKQSPAEKAGLKPNDEI 145
BSNT_05362___ 148 ISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEI 197
|||:|:||:|.|||.|||||||||||:|::|:.|||.|.||:|.|||.||
BL03390___ctp 146 ISIDGDSMSGMDLNDAVLKIRGKKGSTVTLKVHRPGMKDQLTFTIKRDEI 195
BSNT_05362___ 198 PLETVFASEKKVQGHSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVI 247
||||||||.||||...|||||||:||||||:||...|::||||.|:|||:
BL03390___ctp 196 PLETVFASIKKVQDKPVGYIAISSFSEHTAKDFTAELKKLEKKGIKGLVL 245
BSNT_05362___ 248 DVRGNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAY 297
||||||||||||||:|||||||||.||||||||||:||:|||.|..||.|
BL03390___ctp 246 DVRGNPGGYLQSVEDILKHFVTKDHPYIQIAERNGNKKQYFSKLKEKKPY 295
BSNT_05362___ 298 PVNVITDKGSASASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGS 347
||:|||||||||||||||||||||..||||||.|||||||||||||||||
BL03390___ctp 296 PVSVITDKGSASASEILAGALKEAEGYDVVGDPSFGKGTVQQAVPMGDGS 345
BSNT_05362___ 348 NIKLTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMN 397
||||||||||||.||||||:||:||:.:.||.||||||||||||||.|||
BL03390___ctp 346 NIKLTLYKWLTPKGNWIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMN 395
BSNT_05362___ 398 NEDVKHAQVLLKGLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVIDT 447
|.::|.||.|||||.|.|||||||:::..||||||||..|||.:||:||.
BL03390___ctp 396 NNEIKRAQFLLKGLGFVPGREDGYYNESTKKAVMAFQAANKLKQTGIIDQ 445
BSNT_05362___ 448 RTAETLNRQIEKKKSDEKNDLQLQTALKSLFVN- 480
:||.|:|.:||:||.|||||||||.|||.||..
BL03390___ctp 446 KTANTMNLRIEEKKMDEKNDLQLQAALKVLFNKK 479
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