Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05360 and BL03392
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:29
# Commandline: needle
# -asequence pep-align/BSNT_05360___minJ.1.5803.seq
# -bsequence pep-align/BL03392___swrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05360___minJ-BL03392___swrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05360___minJ-BL03392___swrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05360___minJ
# 2: BL03392___swrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 252/405 (62.2%)
# Similarity: 319/405 (78.8%)
# Gaps: 10/405 ( 2.5%)
# Score: 1319.5
#
#
#=======================================
BSNT_05360___ 1 MSVQWG-IELLKSAGLFFLHPLFWFFIIITLAFGYVRIKRERKTFHTRIA 49
|||:.. |||||.||||||||||:|.:|::||:||.|||||||||||||.
BL03392___swr 1 MSVEESLIELLKGAGLFFLHPLFYFMMIMSLAYGYARIKRERKTFHTRIE 50
BSNT_05360___ 50 DIYDDLKFTYTKGLIPGLLLSVILGGLGISIPLGLLAIIAVITAAAAFTL 99
||||:.||||:|||:.||:||::..|||:.:|:|:|.:||.::.|||.|.
BL03392___swr 51 DIYDEFKFTYSKGLLAGLVLSIVSFGLGLYLPMGMLVLIAAVSVAAALTF 100
BSNT_05360___ 100 RANWMSAAYIVSVSMLIGFGLQIYQAEPFLERF-PQGFAVVWPAVAVFLG 148
|.:.:||||.:.||:::|..:: |.....|:.| ||.....|.|.||.||
BL03392___swr 101 RQSLLSAAYTLGVSIVVGLCIE-YTGFGALDAFLPQLSLANWSAAAVLLG 149
BSNT_05360___ 149 LLIITEGAVAYRSAHVRTSPALVVSSRGLPIGQQLANRVWLLPLFLLVPG 198
||::.||.:.|::||::||||:|:|:||||||||:|.|.||||||:|:||
BL03392___swr 150 LLLVAEGVLVYKTAHIKTSPAIVMSTRGLPIGQQIAGRTWLLPLFILIPG 199
BSNT_05360___ 199 NGLESHLSWWPVFTVPGGSFHFLWIPYFVGFGQRVQGSLPETSIRITAKR 248
:.:||.:.||||.:..|| |..||||||:|||||||||||..||:|||||
BL03392___swr 200 HAIESSVPWWPVLSFNGG-FELLWIPYFIGFGQRVQGSLPIESIKITAKR 248
BSNT_05360___ 249 VCILGLAVAVLGAASLLWTPLAGAAVCTALLGRIFLSIKQRVNDNAAPFY 298
:.:||:.:.::.|.|:.|||||..|...|:.||.|||.|||:|||:|||:
BL03392___swr 249 ISVLGIIILLIAAGSIWWTPLAALAAGAAIAGRAFLSWKQRMNDNSAPFH 298
BSNT_05360___ 299 FSKRDQGLMVLGIIPNTPAEDLELKIGEIITKVNGIPVKNVSDFYEALQH 348
|||||||||||||||||||.||.|||||||||||||.|||.:|||||||.
BL03392___swr 299 FSKRDQGLMVLGIIPNTPAADLGLKIGEIITKVNGIEVKNAADFYEALQK 348
BSNT_05360___ 349 NRAYVKLEIIGLNGEIRFDQRASYEGEHHELGILFVKDD----REDEAAA 394
|||:.|||::|||.||||:||||||||||||||:|||:: :..||||
BL03392___swr 349 NRAFFKLEVVGLNNEIRFEQRASYEGEHHELGIIFVKEEDAVMKHAEAAA 398
BSNT_05360___ 395 SGS-- 397
|..
BL03392___swr 399 SAETE 403
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