Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05309 and BL03409

See DNA alignment / Visit BSNT_05309 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_05309___hisB.1.5803.seq
#    -bsequence pep-align/BL03409___hisB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05309___hisB-BL03409___hisB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05309___hisB-BL03409___hisB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05309___hisB
# 2: BL03409___hisB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity:     171/194 (88.1%)
# Similarity:   182/194 (93.8%)
# Gaps:           0/194 ( 0.0%)
# Score: 908.0
# 
#
#=======================================

BSNT_05309___      1 MRKAERVRKTNETDIELAFTIDGGGQADIKTDVPFMTHMLDLFTKHGQFD     50
                     ||||||.||||||||:|:|.|||.|:|||:||||||||||||||||||||
BL03409___his      1 MRKAERARKTNETDIKLSFHIDGEGKADIQTDVPFMTHMLDLFTKHGQFD     50

BSNT_05309___     51 LSINAKGDVDIDDHHTTEDIGICLGQALLEALGDKKGIKRYGSAFVPMDE    100
                     |||.|||||:|||||||||||||||||||||||||:|||||||:.|||||
BL03409___his     51 LSIEAKGDVEIDDHHTTEDIGICLGQALLEALGDKQGIKRYGSSMVPMDE    100

BSNT_05309___    101 ALAQVVIDLSNRPHLEMRVDFPAAKVGTFDTELVHEFLWKLALEARMNLH    150
                     |||||.||||||||||.|.:||:.|:||||||||||||||.|||||||||
BL03409___his    101 ALAQVAIDLSNRPHLEFRAEFPSRKIGTFDTELVHEFLWKFALEARMNLH    150

BSNT_05309___    151 VIVHYGTNTHHMIEAVFKALGRALDEATTIDPRVKGIPSTKGML    194
                     |||||||||||||||:|||||||||||..|||||||||||||||
BL03409___his    151 VIVHYGTNTHHMIEAIFKALGRALDEAALIDPRVKGIPSTKGML    194


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