Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00925 and BL03423

See DNA alignment / Visit BSNT_00925 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00925___ydfE.1.5803.seq
#    -bsequence pep-align/BL03423___ydfE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00925___ydfE-BL03423___ydfE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00925___ydfE-BL03423___ydfE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00925___ydfE
# 2: BL03423___ydfE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     117/207 (56.5%)
# Similarity:   155/207 (74.9%)
# Gaps:           8/207 ( 3.9%)
# Score: 658.0
# 
#
#=======================================

BSNT_00925___      1 MDIKKQDTRQFKEIKPKIMYYGTSTFLLTTLNEDGTTNISPMSSSWALGH     50
                        .:|::   |.|:|.|:||||...||:|:||||:||:||:|||||||.
BL03423___ydf      1 ---MEQNS---KIIQPSILYYGTPVILLSTMNEDGSTNLSPLSSSWALGD     44

BSNT_00925___     51 YIILGVGLGGKAIDNLERHKECVINLPGPELWENIERISSYSGKKSIPPL    100
                     .|:||:|..|||::|||||..||||:|...||.|:||::||:||:.:|..
BL03423___ydf     45 SIVLGIGTEGKALENLERHAGCVINVPDSSLWRNVERLASYTGKRFVPEE     94

BSNT_00925___    101 KKQLGFTYKKEKYEAAGLTPLQSKTVSPTRIKECPIQIEAEVKHIRLPEY    150
                     ||:|||||.|||:||.|.|...|..|.|.|:.:||:|||||..:||:||:
BL03423___ydf     95 KKRLGFTYLKEKFEAGGFTAADSLAVKPERVADCPLQIEAEAVNIRIPEH    144

BSNT_00925___    151 ESSFAIVETQALHFHAEESIILDENHINPSKWSPLIYNFRHYFGLGREVG    200
                     ...||::||:.||.||.|:|:..|:||:|.||.||||.||||||||.|:|
BL03423___ydf    145 SPYFAVIETKVLHVHAHEAILKGEHHIDPQKWEPLIYLFRHYFGLGGELG    194

BSNT_00925___    201 KTFRSET    207
                     ||||:  
BL03423___ydf    195 KTFRA--    199


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