Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05281 and BL03424
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_05281___yvdA.1.5803.seq
# -bsequence pep-align/BL03424___yvdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05281___yvdA-BL03424___yvdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05281___yvdA-BL03424___yvdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05281___yvdA
# 2: BL03424___yvdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 142/196 (72.4%)
# Similarity: 164/196 (83.7%)
# Gaps: 2/196 ( 1.0%)
# Score: 748.0
#
#
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BSNT_05281___ 1 MVSLTSILEHNQRFVSEKKYEPYKTTKFPSKKLVIVTCMDTRLTELLPQA 50
|..|||||:|||.||.||.||.|:|||||.|||||:|||||||.|||..|
BL03424___yvd 1 MAILTSILKHNQSFVEEKGYEFYETTKFPEKKLVILTCMDTRLLELLHHA 50
BSNT_05281___ 51 MGLKNGDAKIVKNAGAIVSHPFGSVMRSILVAIYELQAEAVCIVGHHECG 100
||||||||||:|||||:|||||||||||||||:||||||.||::||||||
BL03424___yvd 51 MGLKNGDAKIIKNAGAVVSHPFGSVMRSILVAVYELQAEEVCVIGHHECG 100
BSNT_05281___ 101 MSGLNASSILEKAKERGVEDSCLNLLTSAGLDLKTWLTGFHSVEESVSHS 150
|:.|||||||:|||:|||:|.||.||..:|:||.||:|||.|||:|||||
BL03424___yvd 101 MASLNASSILQKAKQRGVDDGCLELLQHSGIDLDTWMTGFDSVEDSVSHS 150
BSNT_05281___ 151 VNMIKNHPLLPKKVPVHGLVIHPETGKLDVVINGYETELINNHS-- 194
||||:.||||...||||||||.|:||:||||.:||..|.::...
BL03424___yvd 151 VNMIRKHPLLSSDVPVHGLVIDPKTGRLDVVEDGYSREDVSLSEVR 196
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