Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05188 and BL03442

See DNA alignment / Visit BSNT_05188 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence pep-align/BSNT_05188___yveO.1.5803.seq
#    -bsequence pep-align/BL03442___yveO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05188___yveO-BL03442___yveO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05188___yveO-BL03442___yveO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05188___yveO
# 2: BL03442___yveO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     202/280 (72.1%)
# Similarity:   231/280 (82.5%)
# Gaps:           2/280 ( 0.7%)
# Score: 1086.5
# 
#
#=======================================

BSNT_05188___      1 MNSG--PKVSVIMGIYNCERTLAESIESILSQSYKNWELILCDDASTDGT     48
                     |..|  ||||||||:||||.|:||||||||:|:|||||||:|||||||||
BL03442___yve      1 MIGGQKPKVSVIMGVYNCENTIAESIESILNQTYKNWELIICDDASTDGT     50

BSNT_05188___     49 LRIAKQYAAHYSDCIKLIQNKTNKRLAASLNHCLSHATGDYIARQDGDDL     98
                     ..:|::||.||:|.||||:|:.|:||||||||||.:|.|.|||||||||:
BL03442___yve     51 YAVARRYADHYADKIKLIKNEKNQRLAASLNHCLQYAGGKYIARQDGDDI    100

BSNT_05188___     99 SFPRRLEKQVAFLEKHRHYQVVGTGMLVFDEFGVRGTRILPSVPEPGIMA    148
                     |.|||.||||||||...||.|||:||:.|||.|:||.|:|||.|||.|||
BL03442___yve    101 SLPRRFEKQVAFLESQSHYHVVGSGMMAFDENGIRGVRMLPSSPEPRIMA    150

BSNT_05188___    149 KGTPFCHGTIMMRASAYRTLKGYLSVRRTRRMEDIDLWLRFFEEGFRGYN    198
                     |||||||.||||||..|..|.||...||||||||:||||||||.||.|||
BL03442___yve    151 KGTPFCHATIMMRADVYEALDGYRVGRRTRRMEDVDLWLRFFEAGFTGYN    200

BSNT_05188___    199 LQEALYKVREDSDAFKRRSFTYSIDNAILVYQACRRLKLPLSDYIYIAKP    248
                     |||||||||||..|||||..:||||||.:|:.||||||||||||||..||
BL03442___yve    201 LQEALYKVREDESAFKRRKLSYSIDNAFIVFAACRRLKLPLSDYIYTMKP    250

BSNT_05188___    249 LIRAFMPAAVMDRYHKKRVMNQQEGLVKHE    278
                     :||..||..:|:||||:|:||:..|:||||
BL03442___yve    251 IIRGLMPPFIMNRYHKRRLMNEGGGVVKHE    280


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