Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05223 and BL03520

See DNA alignment / Visit BSNT_05223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence pep-align/BSNT_05223.1.5803.seq
#    -bsequence pep-align/BL03520___yomQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05223-BL03520___yomQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05223-BL03520___yomQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05223
# 2: BL03520___yomQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      48/108 (44.4%)
# Similarity:    64/108 (59.3%)
# Gaps:          15/108 (13.9%)
# Score: 226.5
# 
#
#=======================================

BSNT_05223         1 MKQIYKYDNKMNYVPSENMIINDGEEIPEGYTDIPPVNPDGAGMYKPVFD     50
                     ||.:||||.|.||:|.|.:.:.|..|:||.|.::.|  ||  |:|...||
BL03520___yom      1 MKWLYKYDEKFNYMPGEEIQVEDDAELPEFYCEVKP--PD--GLYLAKFD     46

BSNT_05223        51 KGKSEWRETATQEYIDSLQPPDPGPSEIEVLQKQVADLYYLIAL------     94
                     ..|.||.|:||:|||:|||||:|.|...::|:||.|.|...:|.      
BL03520___yom     47 PAKGEWFESATKEYIESLQPPEPEPGITDLLKKQNALLSLQVARLQADVE     96

BSNT_05223        95 ----GGA-     97
                         ||| 
BL03520___yom     97 ALKGGGAS    104


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