Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00961 and BL03525
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_00961___ydfS.1.5803.seq
# -bsequence pep-align/BL03525___ydfS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00961___ydfS-BL03525___ydfS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00961___ydfS-BL03525___ydfS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00961___ydfS
# 2: BL03525___ydfS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 146/236 (61.9%)
# Similarity: 190/236 (80.5%)
# Gaps: 1/236 ( 0.4%)
# Score: 769.0
#
#
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BSNT_00961___ 1 MIE-LEVVIRTVASFGLLLIAERILGKQTISQMTIFDFIAAITLGAIAAG 49
|.| :||::|::.:||:||:..|:|||||||||.||||||:||||||.|.
BL03525___ydf 1 MSEHIEVILRSILAFGILLVGSRLLGKQTISQMNIFDFIASITLGAITAN 50
BSNT_00961___ 50 LAYNTSIKPHNMAISFSIFVLTIFLISFLSIKNRKLRKFFAGDPTVLIQN 99
||:|||:|.|:|.::|.|||..|...:::|:.::|.||||||||||:|||
BL03525___ydf 51 LAFNTSLKIHHMVLAFFIFVFVILATAYISLWSQKGRKFFAGDPTVVIQN 100
BSNT_00961___ 100 GKILESNMRKMRYTLDYLNQQLREKEIFNIEEVLFAILETNGQLTVLRKP 149
||:||.||||||||:||||||||||.:|.|||||:||:||||.||||:||
BL03525___ydf 101 GKVLEHNMRKMRYTIDYLNQQLREKNVFKIEEVLYAIVETNGTLTVLKKP 150
BSNT_00961___ 150 QFRHVTKQDLMIAVNQEHRLPIELIMDGEIIENNLKQNRLTESWLLEELR 199
|||:|||:||.:|...|.:|||||||||::...|||.|:||::||..|::
BL03525___ydf 151 QFRNVTKKDLWVATTPEGKLPIELIMDGKMKNENLKDNQLTQAWLQSEMK 200
BSNT_00961___ 200 KRDIKVKETVYAVLLGNGDIYVDQYKDHISVPMDKE 235
||.:...|..||||..:|:||:|.|:|||....|||
BL03525___ydf 201 KRGLSTDEVFYAVLSPDGNIYIDTYEDHIHSSFDKE 236
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