Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00961 and BL03525

See DNA alignment / Visit BSNT_00961 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_00961___ydfS.1.5803.seq
#    -bsequence pep-align/BL03525___ydfS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00961___ydfS-BL03525___ydfS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00961___ydfS-BL03525___ydfS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00961___ydfS
# 2: BL03525___ydfS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     146/236 (61.9%)
# Similarity:   190/236 (80.5%)
# Gaps:           1/236 ( 0.4%)
# Score: 769.0
# 
#
#=======================================

BSNT_00961___      1 MIE-LEVVIRTVASFGLLLIAERILGKQTISQMTIFDFIAAITLGAIAAG     49
                     |.| :||::|::.:||:||:..|:|||||||||.||||||:||||||.|.
BL03525___ydf      1 MSEHIEVILRSILAFGILLVGSRLLGKQTISQMNIFDFIASITLGAITAN     50

BSNT_00961___     50 LAYNTSIKPHNMAISFSIFVLTIFLISFLSIKNRKLRKFFAGDPTVLIQN     99
                     ||:|||:|.|:|.::|.|||..|...:::|:.::|.||||||||||:|||
BL03525___ydf     51 LAFNTSLKIHHMVLAFFIFVFVILATAYISLWSQKGRKFFAGDPTVVIQN    100

BSNT_00961___    100 GKILESNMRKMRYTLDYLNQQLREKEIFNIEEVLFAILETNGQLTVLRKP    149
                     ||:||.||||||||:||||||||||.:|.|||||:||:||||.||||:||
BL03525___ydf    101 GKVLEHNMRKMRYTIDYLNQQLREKNVFKIEEVLYAIVETNGTLTVLKKP    150

BSNT_00961___    150 QFRHVTKQDLMIAVNQEHRLPIELIMDGEIIENNLKQNRLTESWLLEELR    199
                     |||:|||:||.:|...|.:|||||||||::...|||.|:||::||..|::
BL03525___ydf    151 QFRNVTKKDLWVATTPEGKLPIELIMDGKMKNENLKDNQLTQAWLQSEMK    200

BSNT_00961___    200 KRDIKVKETVYAVLLGNGDIYVDQYKDHISVPMDKE    235
                     ||.:...|..||||..:|:||:|.|:|||....|||
BL03525___ydf    201 KRGLSTDEVFYAVLSPDGNIYIDTYEDHIHSSFDKE    236


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