Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00725 and BL03534
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:21
# Commandline: needle
# -asequence pep-align/BSNT_00725___pbpC.1.5803.seq
# -bsequence pep-align/BL03534___pbpC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00725___pbpC-BL03534___pbpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00725___pbpC-BL03534___pbpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00725___pbpC
# 2: BL03534___pbpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 673
# Identity: 413/673 (61.4%)
# Similarity: 521/673 (77.4%)
# Gaps: 12/673 ( 1.8%)
# Score: 2203.0
#
#
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BSNT_00725___ 1 MLKKCILLVFLCVGLIGLIG-CSKTDSPEDRMEAFVKQWNDQQFDDMYQS 49
:||.::.:|:..|.:.|.| ||...:.::.|:.:|.:||:|:|::||:.
BL03534___pbp 1 -MKKRVIHLFIAAGFLLLAGACSNEPTAKESMDQYVDKWNEQKFEEMYEQ 49
BSNT_00725___ 50 LTKDVKKEISKKDFVNRYKAIYEQAGVKNLKVTAGEVDKDDQDNKTMKH- 98
|:.:.:|.|||.||:.|.::||||.||.:|||:. ||.|:.:....|:
BL03534___pbp 50 LSAEAQKSISKDDFIKRNQSIYEQIGVSDLKVST--VDNDEDEKNKEKND 97
BSNT_00725___ 99 ---IPYKVSMNTNAGKVSFKNTAVLKLEKTDDEESWNIDWDPSFIFKQLA 145
|||||||.|.||.|||:..|.|..||.|.:.||.::|:.||||.||.
BL03534___pbp 98 SVTIPYKVSMKTLAGPVSFQGKAKLVKEKKDGDTSWKVNWNQSFIFSQLK 147
BSNT_00725___ 146 DDKTVQIMSIEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIK 195
..:|::|.:.||.||.|||:|||.||.|..|||||:|||:|||.|:.|||
BL03534___pbp 148 KGETIRITAKEPTRGIIYDRNGKALATNATVPEIGVVPGQLGDDKDGVIK 197
BSNT_00725___ 196 ELAKKLDLTEDDIKKKLDQGWVKDDSFVPLKKVKPDQEKLVSEATSLQGV 245
:||..||:.::||:|:|...||.||||||||||||...:|:.:||||.||
BL03534___pbp 198 KLANMLDMEKEDIEKQLSASWVTDDSFVPLKKVKPGSTELLKKATSLPGV 247
BSNT_00725___ 246 TRTNVSSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGIAGL 295
.:.:..|||||||||.||||||:|.||.||||:.||| ||:.|.:||.||
BL03534___pbp 248 LKQDTQSRYYPYGEKAAHLTGYIRPITEEELKQNKEG-YSEHSLLGIVGL 296
BSNT_00725___ 296 ENVYEDKLRGTTGWKIYVPQTGEVIAEKKAKDGEDLHLTIDIKTQTKLYD 345
|::||.:|||..||.|.:|::|..:|.|.||||:|:|.|||||.|.:||.
BL03534___pbp 297 EHIYEKELRGEIGWTISIPESGATVASKDAKDGKDIHTTIDIKKQEELYS 346
BSNT_00725___ 346 ELKDDSGAAVALQPKTGETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKN 395
:|||||||||||:|:||||||||||||||||||:|||...||:|||||.:
BL03534___pbp 347 QLKDDSGAAVALEPQTGETLALVSAPSYDPNGFLFGWKKGEWEKLNKDAS 396
BSNT_00725___ 396 NPFSAKFNKTYAPGSTIKPIAAAIGIKNGTLKADEKKTIKGKEWQKDSSW 445
.||::|||||||||||||||.|:||:||..:||||.|.|:||||||||||
BL03534___pbp 397 APFTSKFNKTYAPGSTIKPITASIGLKNDAIKADEPKKIEGKEWQKDSSW 446
BSNT_00725___ 446 GGYSVTRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGF 495
|||.|||||:||..|:|||||||||||||||.|||.|.|.|.:|||:|||
BL03534___pbp 447 GGYKVTRVSDRLSDVNLENALITSDNIYFAQTALDTGKDQFVEGLKSFGF 496
BSNT_00725___ 496 SEDVPYEFPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPF 545
.|.:.||||.:.|||:|:.:||||||||:|||||||.|||:|||.:||||
BL03534___pbp 497 EEKLDYEFPTKSSSISNEGIDSDILLADSGYGQGQMLMSPIHLAASYTPF 546
BSNT_00725___ 546 VDNGDLVKPTLIKKDSQTADVWHKQVVTKEGAADITKGLKGVVEDERGSA 595
:::|:|:||.|||||.:..::|||.|:...||..|||||||||||.||||
BL03534___pbp 547 LNDGNLIKPHLIKKDGEEKEIWHKNVLPTGGAEAITKGLKGVVEDPRGSA 596
BSNT_00725___ 596 YQPVVKGITVAGKTGTAELKTSKDDKDGTENGWFVGYDYKNKDLLVAMMI 645
|:|||||:|:|||||||||||.||:| |.|||||..||||||:||:.|||
BL03534___pbp 597 YKPVVKGLTIAGKTGTAELKTKKDEK-GKENGWFTAYDYKNKNLLITMMI 645
BSNT_00725___ 646 QNVQDRGGSHYVVEKAKKQFQSN 668
::|.|||||.|||.|.||.|:
BL03534___pbp 646 EDVSDRGGSSYVVNKVKKVFK-- 666
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