Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05315 and BL03598

See DNA alignment / Visit BSNT_05315 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_05315___yvpB.1.5803.seq
#    -bsequence pep-align/BL03598___yvpB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05315___yvpB-BL03598___yvpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05315___yvpB-BL03598___yvpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05315___yvpB
# 2: BL03598___yvpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     146/250 (58.4%)
# Similarity:   186/250 (74.4%)
# Gaps:           6/250 ( 2.4%)
# Score: 781.0
# 
#
#=======================================

BSNT_05315___      1 MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAAN     50
                     ||..:||..:..::.::...|.:.:||.    |:.|.:::..|...:|.|
BL03598___yvp      1 MKFFKTLFFIFFVAVLMTAVLILFSKDA----LSPLAEMLHSSHKTAADN     46

BSNT_05315___     51 SKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTL    100
                     :..  ||..:||||.|.||||.|:|||||||.||||:|||:||.|||..|
BL03598___yvp     47 ANN--KGERQPLDVPLINQMDPPKLYNGCEVASLAMILNYSGYSVTKTEL     94

BSNT_05315___    101 ANQIATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGD    150
                     ||::..|||.|.:||||:|||||||||.|||||.|||.|||.||.:|||:
BL03598___yvp     95 ANEVKRVPLQYENGLKGNPNDGFVGDMENGPGLSVYHGPIYDLAHSYAGN    144

BSNT_05315___    151 KVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEIT    200
                     |..||||.....:|:||.:|.|||||||.:||||::|:||.||:|.:::|
BL03598___yvp    145 KAVDLTGSEPGKIYEQLNQGRPVWVITTVHFTPVNDMETWNTPSGKVDVT    194

BSNT_05315___    201 YSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQMGSQAVVIQK    250
                     ||.|||||||||:.|||:|||||||||||||.:|||:||||||||:||..
BL03598___yvp    195 YSVHSVAVTGYDEDYVYVNDPYGYKNRKTDRENFEKSWKQMGSQAIVIAA    244


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