Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02166 and BL03807

See DNA alignment / Visit BSNT_02166 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence pep-align/BSNT_02166___xhlB.1.5803.seq
#    -bsequence pep-align/BL03807.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02166___xhlB-BL03807.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02166___xhlB-BL03807.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02166___xhlB
# 2: BL03807
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      53/87 (60.9%)
# Similarity:    68/87 (78.2%)
# Gaps:           0/87 ( 0.0%)
# Score: 285.0
# 
#
#=======================================

BSNT_02166___      1 MNTFDKGTVIRTVLLLIALINQTMLMLGKSPLDIQEEQVNQLADALYSAG     50
                     |...|||||:|||||.|||:|||::|.||..|.:.|:|::.|||||||||
BL03807            1 MKHIDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALYSAG     50

BSNT_02166___     51 SIAFTIGTTLAAWFKNNYITEKGKKQRDLLRDNNLTK     87
                     |.||||..:|.||:||||:|.|||.|:::|:...|||
BL03807           51 SAAFTIAASLVAWYKNNYVTSKGKMQKEVLQKKGLTK     87


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