Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05948 and BL03870

See DNA alignment / Visit BSNT_05948 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05948___galE.1.5803.seq
#    -bsequence pep-align/BL03870___galE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05948___galE-BL03870___galE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05948___galE-BL03870___galE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05948___galE
# 2: BL03870___galE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:     160/349 (45.8%)
# Similarity:   215/349 (61.6%)
# Gaps:          30/349 ( 8.6%)
# Score: 774.0
# 
#
#=======================================

BSNT_05948___      1 MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK     50
                     |||||.|||||||||...|||:...::|::|||.....||       ..|
BL03870___gal      1 MAILVCGGAGYIGSHAVAELLSRNEDVVIIDNLQTGHEEA-------ALK     43

BSNT_05948___     51 DLTFYEADLLDREAVDAVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNN    100
                     ..:||..||.|...:..||.||:||||:|||....|||||..|||||.||
BL03870___gal     44 GASFYNGDLRDEAFLRKVFQENDIEAVMHFAADSLVGESVTDPLKYYDNN     93

BSNT_05948___    101 LTGTFILCEAMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQ    150
                     :.|...|.:.|:::.||:|||||:|..||.|:..||.|..|...|||||:
BL03870___gal     94 VYGAVCLLKVMKEFDVKQIVFSSTAATYGEPDRVPIMETDPTDPTNPYGE    143

BSNT_05948___    151 TKLMLEQILRDLHTADNEWSV-------ALLRYFNPFGAHPSGRIGED--    191
                     |||.:|::|:        ||.       .:|||||..|||..|.||||  
BL03870___gal    144 TKLAIEKMLK--------WSEKAYGIRHVVLRYFNVAGAHVDGLIGEDHQ    185

BSNT_05948___    192 PNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDLAEG    241
                     |.   .:|:|.:.|||:||.:::.:||:||||.|||.:||||||:||.:.
BL03870___gal    186 PE---THLIPIILQVALGKRDKIMIFGDDYPTPDGTCIRDYIHVMDLVDA    232

BSNT_05948___    242 HVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRR    291
                     |:.|:|::.|...:..||||.|||:||.|:|:...||:|..:|...|:||
BL03870___gal    233 HILAVERLRNGGESAVYNLGNGTGFSVKEVVETARKVTGCPIPAEVAERR    282

BSNT_05948___    292 PGDIATCFADPAKAKRDLGWEAKRG-LEEMCADSWRWQSSNVNGYKSAE    339
                     .||.|...|...||.::|||:.|.. ||.:...:|:|..::.|||:|  
BL03870___gal    283 AGDPAQLIASSEKAVKELGWQPKYAELETIIDSAWKWFKAHPNGYQS--    329


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