Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05814 and BL03894

See DNA alignment / Visit BSNT_05814 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_05814___ywdF.1.5803.seq
#    -bsequence pep-align/BL03894___ywdF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05814___ywdF-BL03894___ywdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05814___ywdF-BL03894___ywdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05814___ywdF
# 2: BL03894___ywdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     193/272 (71.0%)
# Similarity:   226/272 (83.1%)
# Gaps:           4/272 ( 1.5%)
# Score: 1002.0
# 
#
#=======================================

BSNT_05814___      1 MKISIVIVTYNRIPALCELLESISRQTLKPYEIIIVNDAGESVVPVKALY     50
                     |.||||:||:||:.|||||||||::|:::|:|:||||||||||..|:.||
BL03894___ywd      1 MNISIVVVTHNRVTALCELLESIAKQSVEPFEVIIVNDAGESVDFVERLY     50

BSNT_05814___     51 PELPIAVINLEKNSGHVAARNAGVKEASGDCIMLCDDDDFFTPGHIEKMA    100
                     .||||.||:|::|..||.|||.||||||||.||||||||||||.|:|:|.
BL03894___ywd     51 SELPIRVIHLKENVKHVKARNIGVKEASGDVIMLCDDDDFFTPCHMERML    100

BSNT_05814___    101 KEIETADFVHSDAEIVSFEEKYGTRYPVSRKLFAYTADYEDMRVFSTYVP    150
                     ..:||||||:|||||||||||...|.|.||.||||:.:.::||.||||||
BL03894___ywd    101 NALETADFVYSDAEIVSFEEKEDMRIPTSRYLFAYSFNLDEMRKFSTYVP    150

BSNT_05814___    151 SGSMYRRFLHDEIGYFDADVHNYWDWDFYLRAAKDYRVKRVPCASVIYAF    200
                     |||||:|.|||||||||..|||||||||:||||:.:||||||.|||||||
BL03894___ywd    151 SGSMYKRSLHDEIGYFDPAVHNYWDWDFFLRAAERFRVKRVPFASVIYAF    200

BSNT_05814___    201 SDAGDNQSADLGAKRKQYLDRLSEKHGLGELPTKNFAVLLEEPEMKRREA    250
                     ||.|||||.|||..|:.|||.|||||.||:||||||.||||||.||:|||
BL03894___ywd    201 SDQGDNQSGDLGGMRQYYLDVLSEKHQLGKLPTKNFFVLLEEPAMKKREA    250

BSNT_05814___    251 KSEMVWDGEPVYSRLHRS----    268
                     :||:||||:||.|||..:    
BL03894___ywd    251 ESEIVWDGKPVASRLTAARQLN    272


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