Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05804 and BL03954
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence pep-align/BSNT_05804___ywdL.1.5803.seq
# -bsequence pep-align/BL03954___gerQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05804___ywdL-BL03954___gerQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05804___ywdL-BL03954___gerQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05804___ywdL
# 2: BL03954___gerQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 115/188 (61.2%)
# Similarity: 133/188 (70.7%)
# Gaps: 17/188 ( 9.0%)
# Score: 563.5
#
#
#=======================================
BSNT_05804___ 1 MKPKKNQYQQMQAFDNMQGYQPQFGANPYPQQGQGSQM-QPMGMQPMMPM 49
||.||||:|.:|..: |..::.|.|.|||||.||..|| |..|.||...|
BL03954___ger 1 MKFKKNQFQPLQELE-MPDFRQQMGPNPYPQMGQMGQMYQQQGQQPFTQM 49
BSNT_05804___ 50 QQGQQGQQGQQGFGFPG----QQQGGGFQIPSGPTPSG--PGQSVPGMLP 93
.|||.:..|| |.|..|.|:| |.||| |..|:|||||
BL03954___ger 50 -------GGQQSYQQPGPQLTQPQPAGVQVP--PMPSGQQPSPSIPGMLP 90
BSNT_05804___ 94 VEESYIENILRLNRGKTATIYMTFENSKEWGSKIFRGVIEAAGRDHIIIS 143
:|:|||||||||||||.||:||||||:.||.:|:|||.||||||||||:|
BL03954___ger 91 LEQSYIENILRLNRGKVATVYMTFENNPEWNAKVFRGEIEAAGRDHIILS 140
BSNT_05804___ 144 DPKSGTRYLLLTIYLDYITFDEEIAYTYPYSMASYSPR 181
|.|:|||||||.:|||||||||.|.|.||||||||:||
BL03954___ger 141 DRKTGTRYLLLMVYLDYITFDEPITYDYPYSMASYTPR 178
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