Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04572 and BL03955
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence pep-align/BSNT_04572___yubG.1.5803.seq
# -bsequence pep-align/BL03955.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04572___yubG-BL03955.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04572___yubG-BL03955.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04572___yubG
# 2: BL03955
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 284/451 (63.0%)
# Similarity: 350/451 (77.6%)
# Gaps: 9/451 ( 2.0%)
# Score: 1462.0
#
#
#=======================================
BSNT_04572___ 1 ------MTLQKDKVIKWVRFTPPQVLAIGFFLTIIIGAVLLMLPISTTKP 44
..|.|.|:| ..:|||.||:.|.:.|.|||.||.||.::|..
BL03955 1 MPKLVSSNLVKGKII---NISPPQTLALSFLIIIAIGACLLKLPGASTTY 47
BSNT_04572___ 45 LSWIDALFTAASATTVTGLAVVDTGTQFTVFGQTVIMGLIQIGGLGFMTF 94
:||:||||||.||||||||.|||||..||||||||||.||||||||.|||
BL03955 48 ISWVDALFTATSATTVTGLVVVDTGADFTVFGQTVIMCLIQIGGLGLMTF 97
BSNT_04572___ 95 AVLIVMILGKKIGLKERMLVQEALNQPTIGGVIGLVKVLFLFSISIELIA 144
|||:||::||||||::|:|||||.||.::||::.|||.||:|:|.||.:|
BL03955 98 AVLVVMMIGKKIGLQQRILVQEAFNQTSLGGLVRLVKHLFIFTIVIEFVA 147
BSNT_04572___ 145 ALILSIRLVPQYGWSSGLFASLFHAISAFNNAGFSLWPDNLMSYVGDPTV 194
.||||||.||:||...|||.|||:.||||||||||||||||..|||||.|
BL03955 148 FLILSIRWVPEYGLQKGLFHSLFNTISAFNNAGFSLWPDNLSQYVGDPIV 197
BSNT_04572___ 195 NLVITFLFVTGGIGFTVLFDVMKNRRFKAFSLHTKLMLTGTLMLNAIAML 244
|||||.||:|||||||||.|:...|.|:..|||:|||:.|||::|..|.|
BL03955 198 NLVITGLFITGGIGFTVLLDLWTKRNFRKLSLHSKLMIVGTLIINTTAAL 247
BSNT_04572___ 245 TVFILEYSNPGTLGHLHIVDKLWASYFQAVTPRTAGFNSLDFGSMREGTI 294
.:||||||||||||.|.:.||:|.:|||.|||||||||:||...|...::
BL03955 248 LIFILEYSNPGTLGGLPLADKMWGAYFQGVTPRTAGFNTLDIAQMTTPSL 297
BSNT_04572___ 295 VFTLLLMFIGAGSASTASGIKLTTFIVILTSVIAYLRGKKETVIFRRSIK 344
:..::|||||||||||.|||||||:||::.:.|.:||||.|||:|:|:||
BL03955 298 LLIIVLMFIGAGSASTGSGIKLTTYIVMILATITFLRGKSETVVFKRAIK 347
BSNT_04572___ 345 YPIIIKALAVSVTSLFIVFLGIFALTITEQAPFLQIVFETFSAFGTVGLT 394
...|::|||:.|.|...|...:|.|||||.||||:||||.|||||||||:
BL03955 348 MKTILRALAIIVISFLFVLFALFILTITENAPFLKIVFEVFSAFGTVGLS 397
BSNT_04572___ 395 MGLTPELTTAGKCIIIVIMFIGRIGPLTFVFSFAKTEQSNIRYPDGEVFT 444
|||||:||.|||.:|:::|||||:||||..|:.||.:::.||:|:.||.|
BL03955 398 MGLTPDLTAAGKAVIMMMMFIGRVGPLTMAFTLAKPKKAPIRHPEDEVIT 447
BSNT_04572___ 445 G 445
|
BL03955 448 G 448
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