Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05643 and BL03987
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05643___ywlD.1.5803.seq
# -bsequence pep-align/BL03987___ywlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05643___ywlD-BL03987___ywlD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05643___ywlD-BL03987___ywlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05643___ywlD
# 2: BL03987___ywlD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 135/186 (72.6%)
# Similarity: 157/186 (84.4%)
# Gaps: 1/186 ( 0.5%)
# Score: 688.0
#
#
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BSNT_05643___ 1 -MSDLFIGELITLSIMAFALGMDAFSVGLGMGMVKLRKKQIFYIGFIIGL 49
..|:.|||::|||:||||||||||||||||||.||::.|:|.||.||||
BL03987___ywl 1 MNVDVLIGEILTLSMMAFALGMDAFSVGLGMGMAKLKRNQVFQIGVIIGL 50
BSNT_05643___ 50 FHVIMPLAGMAAGNMLSGLLGVLAVYIGGALLFVLGVQMLMASFKQSEER 99
|||||||.||.||..|||.||.||.|||||||.|||:||::|||.:|.|:
BL03987___ywl 51 FHVIMPLGGMIAGQFLSGALGALAGYIGGALLLVLGIQMIVASFNKSGEQ 100
BSNT_05643___ 100 FMSPAGPGLLLFAIGVSLDSFSVGLSLGIYGSHPFLTITLFGLFSMMLTW 149
.:||.|.||.:||:||||||||||||||:||:.|.|||.|||||||:|||
BL03987___ywl 101 IISPHGFGLFVFAVGVSLDSFSVGLSLGLYGTKPILTIFLFGLFSMVLTW 150
BSNT_05643___ 150 LGLLVGKQVQSWLGTYSEALGGIILIVFGLKLLLPI 185
.|||:||:||:|||.|||||||.||:.|||||||||
BL03987___ywl 151 AGLLLGKKVQTWLGAYSEALGGAILLSFGLKLLLPI 186
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