Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05626 and BL03997
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence pep-align/BSNT_05626___atpH.1.5803.seq
# -bsequence pep-align/BL03997___atpH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05626___atpH-BL03997___atpH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05626___atpH-BL03997___atpH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05626___atpH
# 2: BL03997___atpH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 122/184 (66.3%)
# Similarity: 153/184 (83.2%)
# Gaps: 3/184 ( 1.6%)
# Score: 623.0
#
#
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BSNT_05626___ 1 MSGSAVSKRYASALFDIANESAQLNQVEEELTVVKQVFQNEKALNDVLNH 50
||.||||||||:||||||.||..:|::||||||||::|...|.||.||.|
BL03997___atp 1 MSQSAVSKRYAAALFDIALESKLVNEIEEELTVVKKIFIEHKDLNAVLGH 50
BSNT_05626___ 51 PKMPAAKKKELIQNAFGSLSQSVLNTIFLLIDRHRAAIVLELTDEFIKLA 100
||:||.|||::::::|||:|.:||:|::||:||.|.:||.:|.||::|:|
BL03997___atp 51 PKVPAEKKKQILKDSFGSVSTAVLHTLYLLVDRSRTSIVPDLADEYVKMA 100
BSNT_05626___ 101 NEARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIG 150
|..|.||||||||||||::.|:...||||||:||.||||:||||..||||
BL03997___atp 101 NRFRGTEDAIVYSVKPLSEEEISSFSQVFAKEAGAASLRVRNEVNPDLIG 150
BSNT_05626___ 151 GIKVRIGNRIYDGSVSGKLQRIERQLAGENR--- 181
|:|:|||||||||||.|||.|||||||||||
BL03997___atp 151 GVKIRIGNRIYDGSVRGKLDRIERQLAGENRKKG 184
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