Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05618 and BL04002

See DNA alignment / Visit BSNT_05618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence pep-align/BSNT_05618___ywzB.1.5803.seq
#    -bsequence pep-align/BL04002___ywzB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05618___ywzB-BL04002___ywzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05618___ywzB-BL04002___ywzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: BL04002___ywzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      54/77 (70.1%)
# Similarity:    67/77 (87.0%)
# Gaps:           1/77 ( 1.3%)
# Score: 292.0
# 
#
#=======================================

BSNT_05618___      1 MSVLGQQAAIGIVVHLIFIAVTWWALQAVNIDPLIKKGKVVQARLLMILL     50
                     |..:|||||:.|:|||.|||:|||||.||||||||:||||:|||:|||::
BL04002___ywz      1 MEEIGQQAAVSIIVHLFFIALTWWALLAVNIDPLIRKGKVIQARVLMIII     50

BSNT_05618___     51 TIAIGTAVANFFLDYLNYSQQLPYLF-     76
                     |||:|:.|:|||||||.||:||..|| 
BL04002___ywz     51 TIAVGSTVSNFFLDYLYYSRQLQNLFS     77


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.