Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00259 and BL05017

See DNA alignment / Visit BSNT_00259 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00259___ybaJ.1.5803.seq
#    -bsequence pep-align/BL05017.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00259___ybaJ-BL05017.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00259___ybaJ-BL05017.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00259___ybaJ
# 2: BL05017
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:      61/322 (18.9%)
# Similarity:   101/322 (31.4%)
# Gaps:         132/322 (41.0%)
# Score: 129.0
# 
#
#=======================================

BSNT_00259___      1 MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVP     50
                          ...:.|.::.::..|.:..:......||.             |:.
BL05017            1 -----MRKNAATEEAIQRWNRFADSYAANHTEQG-------------DIH     32

BSNT_00259___     51 KDWF---------PPVKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEK     91
                     |:.|         ..||..|||....|.|....:|||..|.||.:|.|.:
BL05017           33 KEVFLNPVIFSLIETVKNQKVLDAGCGEGYLSRMLAAREAVVTAVDYSTR     82

BSNT_00259___     92 QLNQDKMIAER--DGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVEN    139
                     .|   ::..||  |||.||...|:.:||...:::|||:|   ::|:.:::
BL05017           83 ML---EIAKERTPDGLHIHYRHGNCEDLHFLDEQSFDII---ISNMVIQD    126

BSNT_00259___    140 VL---PVWKEAHRVLKRNGVLISGFVNPVVFLFDTELEQQGVLKVKHSIP    186
                     :.   ..::|.||:||..|..|...::|.                     
BL05017          127 LANDEKAFQEMHRLLKDGGCFIFSILHPC---------------------    155

BSNT_00259___    187 YADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKG    236
                     :..||           ...|..:.|..|.    ..:|..|....:.:..|
BL05017          156 FVTPE-----------SGWERTKDGQKLH----WNVDRYFYEGAYEQPLG    190

BSNT_00259___    237 G----FV----LDQYIHTYSATRSVKV-----------------------    255
                     |    |:    |..||:|.     :|.                       
BL05017          191 GEEKMFLFHRTLTSYINTI-----IKAGFQLEAVEEPRPSKEMLKKYPSF    235

BSNT_00259___    255 ----------------------    255
                                           
BL05017          236 EEDLRCPDFIVFKLRKPGGDVR    257


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