Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03997 and BL05287

See DNA alignment / Visit BSNT_03997 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence pep-align/BSNT_03997___yrvM.1.5803.seq
#    -bsequence pep-align/BL05287___yrvM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03997___yrvM-BL05287___yrvM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03997___yrvM-BL05287___yrvM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03997___yrvM
# 2: BL05287___yrvM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     227/254 (89.4%)
# Similarity:   243/254 (95.7%)
# Gaps:           0/254 ( 0.0%)
# Score: 1154.0
# 
#
#=======================================

BSNT_03997___      1 MLHQFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRIL     50
                     |||||||||||||||||..||||||||||||||||||||||||||||||:
BL05287___yrv      1 MLHQFSRNELAIGKEGLNILKNSTVAVLGVGGVGSFAAEALARSGVGRIV     50

BSNT_03997___     51 LVDKDDVDITNVNRQLHALLSTVGQPKVDLMKARIADINPECEVISLKMF    100
                     :|||||||||||||||.|||||||||||||||||||||||||:||:||||
BL05287___yrv     51 MVDKDDVDITNVNRQLPALLSTVGQPKVDLMKARIADINPECDVIALKMF    100

BSNT_03997___    101 YTEETYEQFFDYDLDYVIDASDTICYKIHLMKECLKRDIPLISSMGAANK    150
                     ||||||||||.|:.||||||||||.||||||||||||.|.:|||||||||
BL05287___yrv    101 YTEETYEQFFAYEPDYVIDASDTIHYKIHLMKECLKRGINIISSMGAANK    150

BSNT_03997___    151 TDPTRFQIADISKTHTDPIAKVVRTKLRKEGIKKGVQVIFSDESPIVIRE    200
                     |||||||:||||||||||||||:||:||||||.||::|:|||||||||||
BL05287___yrv    151 TDPTRFQVADISKTHTDPIAKVIRTRLRKEGITKGIKVVFSDESPIVIRE    200

BSNT_03997___    201 DVRKEVGNDEAKIRKAKMPPSSNAFVPSVAGLIMGGHVVMDLLKDIEIKR    250
                     |||:.|||||||||||:|||||||||||||||||||||:|:|||||.|||
BL05287___yrv    201 DVRQVVGNDEAKIRKAQMPPSSNAFVPSVAGLIMGGHVIMELLKDIPIKR    250

BSNT_03997___    251 VKDK    254
                     ||||
BL05287___yrv    251 VKDK    254


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