Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04061 and BL05293

See DNA alignment / Visit BSNT_04061 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:06
# Commandline: needle
#    -asequence pep-align/BSNT_04061___spoIVFB.1.5803.seq
#    -bsequence pep-align/BL05293___spoIVFB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04061___spoIVFB-BL05293___spoIVFB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04061___spoIVFB-BL05293___spoIVFB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04061___spoIVFB
# 2: BL05293___spoIVFB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     203/288 (70.5%)
# Similarity:   238/288 (82.6%)
# Gaps:           0/288 ( 0.0%)
# Score: 1120.0
# 
#
#=======================================

BSNT_04061___      1 MNKWLDLILKIHVHPFLWIIAALGLLTGHMKALFCLLLIVLIHELGHAAL     50
                     |:||.:|..|:|:||.||::.|:|::|||:||||||::|:|||||||||.
BL05293___spo      1 MSKWTELFTKLHIHPLLWLVMAIGIMTGHIKALFCLMIIILIHELGHAAA     50

BSNT_04061___     51 AVFFSWRIKRVFLLPFGGTVEVEEHGNRPLKEEFAVIIAGPLQHIWLQFA    100
                     ||:||||||.:||||||||:||:||||||||||.|||.|||:||||||||
BL05293___spo     51 AVYFSWRIKGIFLLPFGGTLEVDEHGNRPLKEELAVIAAGPVQHIWLQFA    100

BSNT_04061___    101 AWMLAEVSVIHQHTFELFTFYNLSILFVNLLPIWPLDGGKLLFLLFSKQL    150
                     ||:||..|:|..|.||.||||||:||.:||.|||||||||||||||||.|
BL05293___spo    101 AWLLAVNSLISPHIFETFTFYNLTILLINLFPIWPLDGGKLLFLLFSKHL    150

BSNT_04061___    151 PFQKAHRLNLKTSLCFCLLLGCWVLFVIPLQISAWVLFVFLAVSLFEEYR    200
                     |:|||.|:.|..|...|.:|....|.|.|.|:|||||.||||.||::|||
BL05293___spo    151 PYQKAQRMMLAVSCFCCAVLIAATLLVSPSQLSAWVLLVFLAASLYQEYR    200

BSNT_04061___    201 QRHYIHVRFLLERYYGKNRELEKLLPLTVKAEDKVYHVMAEFKRGCKHPI    250
                     .|||.|:|||||||||..||:.:|.|:||.||.::|.||..|||||||||
BL05293___spo    201 NRHYAHIRFLLERYYGNEREVRRLAPITVCAEQQIYEVMLMFKRGCKHPI    250

BSNT_04061___    251 IIEKSGQKLSQLDENEVLHAYFADKRTNSSMEELLLPY    288
                     ||||.|||||||||||||||||.||||.||||:|||.|
BL05293___spo    251 IIEKDGQKLSQLDENEVLHAYFTDKRTTSSMEDLLLVY    288


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