Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05909 and BL05369
See
DNA alignment /
Visit
BSNT_05909 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05909___yxlJ.1.5803.seq
# -bsequence pep-align/BL05369___yxlJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05909___yxlJ-BL05369___yxlJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05909___yxlJ-BL05369___yxlJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05909___yxlJ
# 2: BL05369___yxlJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 143/196 (73.0%)
# Similarity: 161/196 (82.1%)
# Gaps: 0/196 ( 0.0%)
# Score: 775.0
#
#
#=======================================
BSNT_05909___ 1 MTREKNPLPITFYQKTALELAPSLLGCLLVKETDEGTASGYIVETEAYMG 50
|.....|||:.||.|..:|||.|||||||||||:||.|||||||||||.|
BL05369___yxl 1 MNPAHEPLPLEFYNKPTIELARSLLGCLLVKETEEGPASGYIVETEAYKG 50
BSNT_05909___ 51 AGDRAAHSFNNRRTKRTEIMFAEAGRVYTYVMHTHTLLNVVAAEEDVPQA 100
.|||||||:.||||||||||:.|||.||||.||||||:|||:...|.|:|
BL05369___yxl 51 PGDRAAHSYGNRRTKRTEIMYREAGVVYTYTMHTHTLINVVSGGADEPEA 100
BSNT_05909___ 101 VLIRAIEPHEGQLLMEERRPGRSPREWTNGPGKLTKALGVTMNDYGRWIT 150
|||||:|||||..|||:||.|:.||:||||||||||||.:|||||||.:|
BL05369___yxl 101 VLIRALEPHEGLALMEKRRSGKKPRDWTNGPGKLTKALSITMNDYGRPLT 150
BSNT_05909___ 151 EQPLYIESGYTPEAISTGPRIGIDNSGEARDYPWRFWVTGNRYVSR 196
..||||..||.|:.|.:|||||||||||||:||||||:.|||||||
BL05369___yxl 151 GPPLYIAKGYEPQDILSGPRIGIDNSGEAREYPWRFWIKGNRYVSR 196
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.