Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00075 and BPUM_0024

See DNA alignment / Visit BSNT_00075 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00075___yabE.1.24716.seq
#    -bsequence pep-align/BPUM_0024___yabE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00075___yabE-BPUM_0024___yabE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00075___yabE-BPUM_0024___yabE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00075___yabE
# 2: BPUM_0024___yabE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity:     261/437 (59.7%)
# Similarity:   330/437 (75.5%)
# Gaps:          37/437 ( 8.5%)
# Score: 1365.0
# 
#
#=======================================

BSNT_00075___      1 MGEREGRVDSLLDTLYNLSEEKEAFFITQKMKKLFSVKLSKSKVILVAAC     50
                                                   ||.||||||.|.||:|:..|
BPUM_0024___y      1 ------------------------------MKNLFSVKLGKGKVLLLVVC     20

BSNT_00075___     51 LLLAGSGTAYAAHELTKQSVSVSINGKKKHIRTHANTVGDLLETLDIKTR    100
                     |||||:||||.||||||||:::|||||:|.||||..||..||..|.|||:
BPUM_0024___y     21 LLLAGTGTAYGAHELTKQSITISINGKEKTIRTHEETVAQLLSDLGIKTK     70

BSNT_00075___    101 DEDKITPAKQTKITADMDVVYEAAKPVKLTINGEEKTLWSTAKTVGALLD    150
                     .||.|:|:..|||..:|::||:||.||.||::|:|||:|:|.:||||||.
BPUM_0024___y     71 AEDHISPSLNTKIEDNMNIVYDAAIPVHLTLDGKEKTIWTTDQTVGALLK    120

BSNT_00075___    151 EQDVDVKEQDQIDPAIDTDISKDMKINIEPAFQVTVNDAGKQKKIWTTST    200
                     .:.:|:.:.||:.|..:..|.|||.:.:|.||:|:|||.||:||:|||||
BPUM_0024___y    121 NEKIDIGKHDQVTPGKNDKIKKDMDLVVEQAFEVSVNDGGKEKKVWTTST    170

BSNT_00075___    201 TVADFLKQQKMNIKDEDKIKPALDAKLTKGKADITITRIEKVTDVVEEKI    250
                     |||||||||::.:|..|||||||.:.:||..|||.|||:|||||||||||
BPUM_0024___y    171 TVADFLKQQELKLKKHDKIKPALHSHITKKSADIQITRVEKVTDVVEEKI    220

BSNT_00075___    251 AFDVKKQEDASLEKGKEKVVQKGKEGKLKKHFEVVKENGKEVSRELVKEE    300
                     |||.|.::|.|||||||||::||:|||||||:.:||||||.||:||:||.
BPUM_0024___y    221 AFDTKHKKDRSLEKGKEKVLKKGEEGKLKKHYAIVKENGKVVSKELIKEV    270

BSNT_00075___    301 TAEQSKDKVIAVGTKQSSPKFETVSASGDSKTVVSRSNESTGKVMTVSST    350
                     |.:.|||:::||||::|..:.:...|       |||||||:||...|:||
BPUM_0024___y    271 TEKDSKDRLVAVGTQESQEEPKATPA-------VSRSNESSGKEFYVTST    313

BSNT_00075___    351 AYTASCSGCSGHTATGVNLKNNPNAKVIAVDPNVIPLGSKVHVEGYGYAI    400
                     ||||||:||:|.|:||.|||:||.||||||||:||||||||:|||||||:
BPUM_0024___y    314 AYTASCAGCTGRTSTGYNLKSNPGAKVIAVDPSVIPLGSKVYVEGYGYAV    363

BSNT_00075___    401 AADTGSAIKGNKIDVFFPEKSSAYRWGNKTVKIKILN    437
                     |:||||||||||||||.|.||:||:||||.|||::|.
BPUM_0024___y    364 ASDTGSAIKGNKIDVFVPNKSAAYQWGNKRVKIRVLK    400


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