Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00076 and BPUM_0025

See DNA alignment / Visit BSNT_00076 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:00
# Commandline: needle
#    -asequence pep-align/BSNT_00076___rnmV.1.24716.seq
#    -bsequence pep-align/BPUM_0025___rnmV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00076___rnmV-BPUM_0025___rnmV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00076___rnmV-BPUM_0025___rnmV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00076___rnmV
# 2: BPUM_0025___rnmV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity:     144/186 (77.4%)
# Similarity:   161/186 (86.6%)
# Gaps:           0/186 ( 0.0%)
# Score: 729.0
# 
#
#=======================================

BSNT_00076___      1 MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRG     50
                     |||||||||||||||||:|:||||||||||||||.|.||.|:||||:|||
BPUM_0025___r      1 MKIKEIIVVEGRDDTARVKMAVDADTIETNGSAIGDTVIQQVRLAQETRG     50

BSNT_00076___     51 VIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASV    100
                     ||||||||||||||||||:|||||||||||||||||.|..:||||||||:
BPUM_0025___r     51 VIILTDPDFPGEKIRKTIAEAVPGCKHAFLPKHLAKAKRDKGIGVEHASL    100

BSNT_00076___    101 ESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGHAAKCRRERLGDLLKI    150
                     :|||.||.:||||||...|||:.:||..||||||.::|.||||||.||.|
BPUM_0025___r    101 DSIRECLAHVHEEMEVTESDITLDDLFDAGLIGGESSKRRRERLGVLLNI    150

BSNT_00076___    151 GYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE    186
                     ||||.|||.|||.||||.|.||::||.|||:||.:|
BPUM_0025___r    151 GYTNAKQLHKRLHMFQITKHDFIAALKTVMQEEADE    186


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