Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00087 and BPUM_0034

See DNA alignment / Visit BSNT_00087 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:01
# Commandline: needle
#    -asequence pep-align/BSNT_00087___gcaD.1.24716.seq
#    -bsequence pep-align/BPUM_0034___gcaD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00087___gcaD-BPUM_0034___gcaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00087___gcaD-BPUM_0034___gcaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: BPUM_0034___gcaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity:     385/466 (82.6%)
# Similarity:   415/466 (89.1%)
# Gaps:          10/466 ( 2.1%)
# Score: 1974.0
# 
#
#=======================================

BSNT_00087___      1 ----------MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDE     40
                               |||||||:||||:||||||||||||||||||||||||.||
BPUM_0034___g      1 MDNRDIGGQSMDKRFAVILAAGKGTRMKSKLYKVLHPVCGKPMVEHVADE     50

BSNT_00087___     41 ALKLSLSKLVTIVGHGAEEVKKQLGDKSEYALQAEQLGTAHAVKQAQPFL     90
                     ||||||:|||||||||||:||:||||:||||||.||||||||||||:.||
BPUM_0034___g     51 ALKLSLAKLVTIVGHGAEDVKEQLGDRSEYALQEEQLGTAHAVKQAKSFL    100

BSNT_00087___     91 ADEKGVTIVICGDTPLLTAETMEQMLKEHAQREAKATILTAVAEDPTGYG    140
                     |.|||.|||||||||||||||||.||.||.:.:||.|||||.||||||||
BPUM_0034___g    101 AQEKGTTIVICGDTPLLTAETMEAMLSEHQKHQAKVTILTARAEDPTGYG    150

BSNT_00087___    141 RIIRSENGAVQKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSN    190
                     ||||.|.|||.||||||||::.||.|.|||||||||.||.|||.|:||||
BPUM_0034___g    151 RIIRDETGAVVKIVEHKDANDAERQVNEINTGTYCFSNEDLFRVIEQVSN    200

BSNT_00087___    191 DNAQGEYYLPDVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFM    240
                     :|||||||||||||||||||:|||||||..|:||||||||:|||||||||
BPUM_0034___g    201 ENAQGEYYLPDVIEILKNEGQTVAAYQTPQFEETLGVNDRIALSQAEQFM    250

BSNT_00087___    241 KERINKRHMQNGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGED    290
                     |.|||.:||:||||||||.|||||||||||.||:|||||||||.|:||.|
BPUM_0034___g    251 KRRINHQHMKNGVTLIDPENTYISPDAVIGEDTMIYPGTVIKGNVKIGAD    300

BSNT_00087___    291 TIIGPHTEIMNSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGN    340
                     .||||:|||::|.||.|||||||||..|:||.||.|||||||||.|.||:
BPUM_0034___g    301 AIIGPNTEIVDSIIGDRTVIKQSVVCDSEVGVDVTIGPFAHIRPLSKIGD    350

BSNT_00087___    341 EVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGK    390
                     |||||||||||||.||||||.|||||:|||||||||||||||||||||||
BPUM_0034___g    351 EVKIGNFVEIKKTVFGDRSKVSHLSYIGDAEVGTDVNLGCGSITVNYDGK    400

BSNT_00087___    391 NKYLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIAR    440
                     ||:|||||||||||||||||||||||:|||||||||||||||..||:|||
BPUM_0034___g    401 NKFLTKIEDGAFIGCNSNLVAPVTVGKGAYVAAGSTVTEDVPQDALSIAR    450

BSNT_00087___    441 ARQVNKDDYVKNIHKK    456
                     ||||||:|||||||||
BPUM_0034___g    451 ARQVNKEDYVKNIHKK    466


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