Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00097 and BPUM_0042

See DNA alignment / Visit BSNT_00097 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:02
# Commandline: needle
#    -asequence pep-align/BSNT_00097___yabN.1.24716.seq
#    -bsequence pep-align/BPUM_0042___yabN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00097___yabN-BPUM_0042___yabN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00097___yabN-BPUM_0042___yabN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00097___yabN
# 2: BPUM_0042___yabN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 494
# Identity:     323/494 (65.4%)
# Similarity:   404/494 (81.8%)
# Gaps:           5/494 ( 1.0%)
# Score: 1751.0
# 
#
#=======================================

BSNT_00097___      1 MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEKETK     50
                     |||||||||||||||||||:|::|.|.:|..:::||:||||..||.:|..
BPUM_0042___y      1 MAGKITVVGLGAGDMDQLTLGVYKQLKQAKEVFMRTQDHPLTAELMQEVP     50

BSNT_00097___     51 NIRYFDDIYEKHDQFEAVYEEIADILFEAARREDVVYAVPGHPFVAEKTV    100
                     ::.:||:||||||||::||:||.:|||:.|..:::|||||||||||||||
BPUM_0042___y     51 SLTFFDEIYEKHDQFDSVYQEITEILFKEAAEKEIVYAVPGHPFVAEKTV    100

BSNT_00097___    101 QLLTEREEKENVQVKVAGGQSFLDATFNALQIDPIEGFQFVDAGTLSADE    150
                     |||..::::..::|.|||||||||||||:||||||||.||||||.:.||:
BPUM_0042___y    101 QLLVSQQQERGIEVSVAGGQSFLDATFNSLQIDPIEGLQFVDAGDMRADD    150

BSNT_00097___    151 LELRHHLIICQVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIKT    200
                     |:|..|::|||||||:|||.|||||||||||||||.|||||||..|:|..
BPUM_0042___y    151 LKLTQHVLICQVYDQITASNVKLTLMEKLPDDYEVYIVTAAGSSLEQITA    200

BSNT_00097___    201 VPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGPNGCP    250
                     ||||||||:|::|||||||:|||::|||||.:|..||.:||.||||.|||
BPUM_0042___y    201 VPLFELDRDVSINNLTSVYVPPIQDEKLLYKQFDIFRDVIRTLRGPGGCP    250

BSNT_00097___    251 WDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQI    300
                     ||:|||::|||.|:|||||||||||||:|.|||:||||||:|||||||||
BPUM_0042___y    251 WDQKQTNESLKPYLIEECYELLEAIDEDDPDHMVEELGDVMLQVLLHAQI    300

BSNT_00097___    301 GEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAE    350
                     |||:|:|:|||||:.::|||:|||||||.|..|.:..:|:.|||.||:.|
BPUM_0042___y    301 GEDDGFFSIDDVIQHVTEKMIRRHPHVFGDTNVSEAEEVVVNWEKIKQLE    350

BSNT_00097___    351 KNTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEM    400
                     |....:|:|.|:|.|||||:||.|||||||||||||.||:|||.|..||.
BPUM_0042___y    351 KPERAASMLQSIPATLPALTKAYKLQKKAAKVGFDWTDVNDIWNKYEEEK    400

BSNT_00097___    401 KEFSSEVSEAPHE---HNLKAEFGDILFALVNVARFYKIEPEEALAMTND    447
                     :||..||:|.|.|   ..:|.||||:||.|||:.|||::|||.|||..|.
BPUM_0042___y    401 QEFLVEVAEKPDESATKQMKDEFGDLLFVLVNIGRFYQLEPETALASANT    450

BSNT_00097___    448 KFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS--    489
                     ||.|||.:||:.||:.|..|.:::||:||.|||:||..||..  
BPUM_0042___y    451 KFMRRFQHIEQKAKDMGRSLEELTLEEMDDLWNDAKRIERGEHT    494


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