Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00101 and BPUM_0045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:03
# Commandline: needle
# -asequence pep-align/BSNT_00101___yabQ.1.24716.seq
# -bsequence pep-align/BPUM_0045___yabQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00101___yabQ-BPUM_0045___yabQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00101___yabQ-BPUM_0045___yabQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00101___yabQ
# 2: BPUM_0045___yabQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 110/215 (51.2%)
# Similarity: 146/215 (67.9%)
# Gaps: 7/215 ( 3.3%)
# Score: 542.0
#
#
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BSNT_00101___ 1 MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWI 50
||||.||||||:|..||:|||||||||:|||.|.|||:|||.|||:|||:
BPUM_0045___y 1 MTLTVQFYTMLSMVAMGIWLGASLDTYKLFVNREKTAKWLLIIHDLLFWL 50
BSNT_00101___ 51 VQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIY 100
|||||||||||..||||||:||||||.||.:.||:|.|::|:.||||
BPUM_0045___y 51 VQGLLFFYVLLLTNEGEFRVYIFLAVALGFSMYQALMKQLYMNILKF--- 97
BSNT_00101___ 101 LVVSVYQ---FFKKLIQHVLFRPIVWTCGAIIWLAAFLFKKTYSLIGFLL 147
||:.||| ..|:|:..::|:||.|....||....||......|:.|..
BPUM_0045___y 98 LVMCVYQAALILKRLVMSIVFQPIRWLITFIISAIMFLLHLLLRLVHFTF 147
BSNT_00101___ 148 LCLYKIVMVLCFPIRFIAK-QCLKLLPVKMRLTFRRYFEKGAGFLKKKKK 196
..::|::.::|:|:.::.. ..:..:|.|.|.:.|.:|.||||.|:..||
BPUM_0045___y 148 RLVWKVLSIVCYPLIWLLNVTIIHRIPEKWRTSMRLFFSKGAGILQGTKK 197
BSNT_00101___ 197 LLITIRTTITRFLKK 211
|..||:|...:|..|
BPUM_0045___y 198 LSGTIKTKWKQFWTK 212
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