Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00123 and BPUM_0054

See DNA alignment / Visit BSNT_00123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:04
# Commandline: needle
#    -asequence pep-align/BSNT_00123___yacB.1.24716.seq
#    -bsequence pep-align/BPUM_0054___yacB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00123___yacB-BPUM_0054___yacB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00123___yacB-BPUM_0054___yacB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00123___yacB
# 2: BPUM_0054___yacB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     220/260 (84.6%)
# Similarity:   236/260 (90.8%)
# Gaps:           8/260 ( 3.1%)
# Score: 1153.0
# 
#
#=======================================

BSNT_00123___      1 --------MGNTNTVLGVYHDGKLEYHWRIETSRHKTEDEFGMILRSLFD     42
                             :|||||||||||:|.|.||||||||||||||||||.:|||||
BPUM_0054___y      1 MKLLLVIDVGNTNTVLGVYHNGDLNYHWRIETSRHKTEDEFGMAIRSLFD     50

BSNT_00123___     43 HSGLMFEQIDGIIISSVVPPIMFALERMCTKYFHIEPQIVGPGMKTGLNI     92
                     :.||||:||:||||||||||:||||||||.|||||.||||||||||||||
BPUM_0054___y     51 YVGLMFDQIEGIIISSVVPPMMFALERMCEKYFHITPQIVGPGMKTGLNI    100

BSNT_00123___     93 KYDNPKEVGADRIVNAVAAIHLYGNPLIVVDFGTATTYCYIDENKQYMGG    142
                     ..||||||||||||||||||||||.||||||||||||||||:|.||||||
BPUM_0054___y    101 MCDNPKEVGADRIVNAVAAIHLYGAPLIVVDFGTATTYCYINEQKQYMGG    150

BSNT_00123___    143 AIAPGITISTEALYSRAAKLPRIEITRPDNIIGKNTVSAMQSGILFGYVG    192
                     ||||||||||||||:||||||||||.|||:|:||||:||||||||:||||
BPUM_0054___y    151 AIAPGITISTEALYTRAAKLPRIEIVRPDHIVGKNTISAMQSGILYGYVG    200

BSNT_00123___    193 QVEGIVKRMKWQAKQEPKVIATGGLAPLIANESDCIDIVDPFLTLKGLEL    242
                     ||||||||||.||||.|||||||||:.||.||||||||||||||||||:|
BPUM_0054___y    201 QVEGIVKRMKQQAKQTPKVIATGGLSTLIGNESDCIDIVDPFLTLKGLQL    250

BSNT_00123___    243 IYERNRVGSV    252
                     ||||||||.:
BPUM_0054___y    251 IYERNRVGVL    260


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