Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00213 and BPUM_0096

See DNA alignment / Visit BSNT_00213 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:09
# Commandline: needle
#    -asequence pep-align/BSNT_00213___rpsL.1.24716.seq
#    -bsequence pep-align/BPUM_0096___rpsL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00213___rpsL-BPUM_0096___rpsL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00213___rpsL-BPUM_0096___rpsL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00213___rpsL
# 2: BPUM_0096___rpsL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     129/139 (92.8%)
# Similarity:   133/139 (95.7%)
# Gaps:           1/139 ( 0.7%)
# Score: 669.0
# 
#
#=======================================

BSNT_00213___      1 MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRV     50
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BPUM_0096___r      1 MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVTSPQKRGVCTRV     50

BSNT_00213___     51 GTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRV    100
                     ||||||||||||||||||||:|.|||||||||||||||||||||||||||
BPUM_0096___r     51 GTMTPKKPNSALRKYARVRLSNLIEVTAYIPGIGHNLQEHSVVLIRGGRV    100

BSNT_00213___    101 KDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK-    138
                     ||||||||||||||||||||:.|.|||||||||:||.. 
BPUM_0096___r    101 KDLPGVRYHIVRGALDTAGVDGRMQGRSKYGTKRPKQSK    139


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