Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00238 and BPUM_0120

See DNA alignment / Visit BSNT_00238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:11
# Commandline: needle
#    -asequence pep-align/BSNT_00238___rpmD.1.24716.seq
#    -bsequence pep-align/BPUM_0120___rpmD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00238___rpmD-BPUM_0120___rpmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00238___rpmD-BPUM_0120___rpmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: BPUM_0120___rpmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      59/60 (98.3%)
# Similarity:    59/60 (98.3%)
# Gaps:           1/60 ( 1.7%)
# Score: 278.0
# 
#
#=======================================

BSNT_00238___      1 MA-KLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINK     49
                     || |||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0120___r      1 MANKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINK     50

BSNT_00238___     50 VSHLVSVKEQ     59
                     ||||||||||
BPUM_0120___r     51 VSHLVSVKEQ     60


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