Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00253 and BPUM_0135

See DNA alignment / Visit BSNT_00253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:12
# Commandline: needle
#    -asequence pep-align/BSNT_00253___truA.1.24716.seq
#    -bsequence pep-align/BPUM_0135___truA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00253___truA-BPUM_0135___truA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00253___truA-BPUM_0135___truA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00253___truA
# 2: BPUM_0135___truA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     174/247 (70.4%)
# Similarity:   203/247 (82.2%)
# Gaps:           0/247 ( 0.0%)
# Score: 950.0
# 
#
#=======================================

BSNT_00253___      1 MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSG     50
                     |::|||:||||..|.|||||||:||||.|:|.|||.:||..:.:|:|:||
BPUM_0135___t      1 MKVKCTVSYDGTHFKGYQVQPGQRTVQTEIESALAKMHKQDELVPIVASG     50

BSNT_00253___     51 RTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGF    100
                     ||||||||.|||||||||||||.||||:|||:||||||.|.:||..|:.|
BPUM_0135___t     51 RTDSGVHAKGQVIHFDTPLSIPMERWPFALNSLLPDDIRVLKAEEVDESF    100

BSNT_00253___    101 HARFSAVKKEYRYFVYTEKHPDVFKRHYAYHFSYRLNVQDMREAAKHLIG    150
                     |||||.|.|||||.|.||.|.:||.|.||.||.|||:...|||||.:|||
BPUM_0135___t    101 HARFSVVSKEYRYKVSTETHQNVFTRQYACHFPYRLDADKMREAAGYLIG    150

BSNT_00253___    151 THDFTSFCAAKTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRII    200
                     ||||||||||.||||||||.||.|:|...:|||:||:.|:||||||||||
BPUM_0135___t    151 THDFTSFCAANTEVQDKVREIYTLEWKNVSDGLEMRVRGNGFLYNMVRII    200

BSNT_00253___    201 AGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN    247
                     |||||:.|.||..|||:|:||.|::|||||:|||.||||||.|:|||
BPUM_0135___t    201 AGTLLEVGSGKFHPDEIKAMLAARNREAAGKTAPSHGLYLWEVFYDN    247


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