Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00345 and BPUM_0163
See
DNA alignment /
Visit
BSNT_00345 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence pep-align/BSNT_00345___ybbR.1.24716.seq
# -bsequence pep-align/BPUM_0163___ybbR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00345___ybbR-BPUM_0163___ybbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00345___ybbR-BPUM_0163___ybbR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: BPUM_0163___ybbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 491
# Identity: 310/491 (63.1%)
# Similarity: 380/491 (77.4%)
# Gaps: 29/491 ( 5.9%)
# Score: 1596.5
#
#
#=======================================
BSNT_00345___ 1 MDKFLNYRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEA 50
|||.||.|||||::||:||||||.||||.|||||||.|||||||||||||
BPUM_0163___y 1 MDKILNNRWAVKLLALVFALLLYGAVNSAQAPTPKKIGESFFPTSTTDEA 50
BSNT_00345___ 51 TLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD 100
||||||||||||||.||||||||||||||||||||||.||||||||||||
BPUM_0163___y 51 TLTDIPVKAYYDDEKYVVTGVPQTVNVTIKGSTSAVKTARQTKNFEIYAD 100
BSNT_00345___ 101 MEHLKTGTHKVELKAKNVSDGMTISINPSVTTVTIQERTTKSFPVEVEYY 150
|::|.||||||||||::||.|:|:|||||||||||||:||..||||.|:|
BPUM_0163___y 101 MQNLSTGTHKVELKARDVSKGLTLSINPSVTTVTIQEKTTAEFPVETEFY 150
BSNT_00345___ 151 NKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIE 200
|::|:|.|||||||||:||.|.:||||:|||.||::||.||||:.|:.||
BPUM_0163___y 151 NQNKIKDGYSPEQPIVNPKKVTVTGSKDVIDKISVIKAFVNLEDVDQQIE 200
BSNT_00345___ 201 KEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDG 250
||||:||||..||.|||::.|||:.||||::|||||||||||||||||||
BPUM_0163___y 201 KEAKLTVYDSSGNELPVELSPSVVNITVPISSPSKKVPFKIERTGSLPDG 250
BSNT_00345___ 251 VSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADILL 300
:||::||:|||||||||||.|||||:|||||.||||||..|::|:|||.:
BPUM_0163___y 251 ISISSIETSPSEVTVYGSQKVLDSLDFIDGVKLDLSKIKDDTEIDADIPI 300
BSNT_00345___ 301 PDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEYLDPESQ 350
||||||:||..|.:.::|.:..::|.:||||..||||.....|::.|.|.
BPUM_0163___y 301 PDGVKKVSPETVKIKVKVATAQEKKIDNVPISIVGLSKDLTSEFVSPSSG 350
BSNT_00345___ 351 AIDVTAKGSPANIKKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS 400
.:.:|||||.:.|.|||.||:|.|:||.||.:|.|.|.::|||||||||:
BPUM_0163___y 351 RLTLTAKGSKSAIDKLKASDVEAYINVGDLNEGTHEVTVQVNGPQNVTWT 400
BSNT_00345___ 401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDDTDKQTNDQKNNQQEDTKN 450
|.|...|:|||| |.|.|..:: |||||....:|...
BPUM_0163___y 401 LSRSKVKVKLTS----TETEDQPAS-----------TNDQKKPSSDDDDQ 435
BSNT_00345___ 451 TDKNNNDQNQDENKDQN-------QDQDEDESTANSQSSSE 484
.:|:..:..||:.|.:: :|:.|||:::
BPUM_0163___y 436 KEKSKEESTQDKAKKESSQRQRIKEDKKEDEASS------- 469
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.