Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00608 and BPUM_0210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:23
# Commandline: needle
# -asequence pep-align/BSNT_00608___yckE.1.24716.seq
# -bsequence pep-align/BPUM_0210.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00608___yckE-BPUM_0210.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00608___yckE-BPUM_0210.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00608___yckE
# 2: BPUM_0210
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 227/483 (47.0%)
# Similarity: 314/483 (65.0%)
# Gaps: 16/483 ( 3.3%)
# Score: 1191.0
#
#
#=======================================
BSNT_00608___ 1 MIHQHPKSFPKHFLWGSASAAYQIEGAWNEDGKGPSVWDVFTKIPGKTFK 50
|.:.....|||.|.||.:::|||:|||||||||||||.|:....|..|
BPUM_0210 1 MRYSTLAPFPKDFFWGGSTSAYQVEGAWNEDGKGPSVIDMRASYPEGT-- 48
BSNT_00608___ 51 GTNGEIAVDHYHRFKEDVALMAEMGLKAYRFSVSWPRVFPKGKGEINEAG 100
|:.::|.|||||:||||.:.|||||||||||::|.|:.|.|.||||:.|
BPUM_0210 49 -TDFKVASDHYHRYKEDVKMFAEMGLKAYRFSIAWTRIIPNGDGEINQKG 97
BSNT_00608___ 101 LAFYDSLIDELLSHHIEPVLTLYHWDLPQALMDEYGGFESRNIIEDFNHY 150
:.||.||||||..:.|||::|:||:|||.||..: ||:.:|..::.|..|
BPUM_0210 98 IEFYHSLIDELRRYDIEPIVTMYHFDLPHALQVK-GGWSNRATVDAFERY 146
BSNT_00608___ 151 CITLYKRFGDRVKYWVTLNEQNYNFNHGFITAMHPPGVKD-RKRFYEANH 199
...|::.:|.:||||:|:||||....||.......|.::: :|..|:.||
BPUM_0210 147 AKVLFQEYGQKVKYWLTINEQNMMILHGSALGTLDPNLENPKKELYQQNH 196
BSNT_00608___ 200 IAFLANAKAIESFREYVPEGKIGPSFAYSPAYPLLSHPEDILAFENAEEF 249
...:|.|||:....:.:||.||||:...:..||....|||:||..|....
BPUM_0210 197 HMLVAQAKAMTLCHQMLPEAKIGPAPNIALIYPASPKPEDVLAAANYNAI 246
BSNT_00608___ 250 MNNWWLDMYCWGTYPQIPFRYLEKQGWAPTIEAGDIELLAKGKPDFVGVN 299
.|..:|||..:|.|..:.:.|::::...|.||.||:::|...||||:..|
BPUM_0210 247 RNWLYLDMAVYGRYNNLAWAYMKEKDILPVIEEGDMDILKSAKPDFIAFN 296
BSNT_00608___ 300 YYQTITYERNPLDGVSEGKMNTTGQKGTNQ--ETGIPGVFKTKKNPHLTT 347
||.:.|.| .|:|..|....:|.:| ::|..||:|...||:|:.
BPUM_0210 297 YYTSQTVE------ASKGDGNDEFARGGDQHLKSGEDGVYKGGNNPYLSK 340
BSNT_00608___ 348 SNWDWTIDAIGLRIGLRRITSRYQLPVFITENGLGEFDKV-EDGTVQDDY 396
:.:.|.||.:|.|..:|.|..|||||:.|||||||.|||: |||::||||
BPUM_0210 341 NAFGWEIDPVGFRSTMREIYDRYQLPLIITENGLGAFDKLEEDGSIQDDY 390
BSNT_00608___ 397 RIDYLRSHLEQCRQAISDGVDLIGYCSWSFTDLLSWLNGYQKRYGFVYVN 446
|||||..|:||.:.||:|||::.|||.||..||:|...|..|||||:|||
BPUM_0210 391 RIDYLEKHIEQIKWAITDGVEVFGYCPWSAIDLISTHQGCSKRYGFIYVN 440
BSNT_00608___ 447 RDEESTYDLKRLKKKSFYWYQDVIKTNGESL-- 477
|||....||||::|||.|||:.:|:.|||::
BPUM_0210 441 RDEFDLKDLKRIRKKSSYWYETLIQQNGENIGE 473
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