Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00502 and BPUM_0257

See DNA alignment / Visit BSNT_00502 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:19
# Commandline: needle
#    -asequence pep-align/BSNT_00502___ycdF.1.24716.seq
#    -bsequence pep-align/BPUM_0257___ycdF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00502___ycdF-BPUM_0257___ycdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00502___ycdF-BPUM_0257___ycdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00502___ycdF
# 2: BPUM_0257___ycdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     190/259 (73.4%)
# Similarity:   234/259 (90.3%)
# Gaps:           1/259 ( 0.4%)
# Score: 1016.0
# 
#
#=======================================

BSNT_00502___      1 MYKDLTGKTAIVTGSSKGIGKAIAERFGQEKMNVVVNYHSDPSGADETLE     50
                     ||:||.||||||||||||||:|||.|||||:|||||||..|..||:||::
BPUM_0257___y      1 MYQDLKGKTAIVTGSSKGIGQAIALRFGQEQMNVVVNYKGDEEGAEETVQ     50

BSNT_00502___     51 IIKQNGGKAVAVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGDEA    100
                     .|:||||:||.|.||||||:||||::|||||||||:||.||||||||:||
BPUM_0257___y     51 AIQQNGGRAVKVHADVSKEDGIQAIMDTALEHFGTVDVFVNNSGFNGEEA    100

BSNT_00502___    101 MPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQ    150
                     |||||:||.||:|||||:||.|||||||:.:|::::|||::||||||||:
BPUM_0257___y    101 MPHEMTLEQWQKVIDVNITGAFLGAKAAIAYMIEHDIKGSILNISSVHQE    150

BSNT_00502___    151 IPRPVNVQYSTSKGGIKMMTETLALNYADKEIRVNAIAPGTIATESNVDT    200
                     ||||.||.|||||||:.|||:||||:||:..||:|||||||:|||||.|.
BPUM_0257___y    151 IPRPFNVHYSTSKGGMNMMTKTLALDYAEAGIRINAIAPGTMATESNDDL    200

BSNT_00502___    201 KKEESRQKQLKKIPMQAFGKPEEVAAAAAWLVSEEASYVTGTTLFVDGGM    250
                     :.|:.:||||:||||:|||:|:|:.:|||:|||:||||:|||||||||||
BPUM_0257___y    201 QDEQKKQKQLEKIPMRAFGEPKEIGSAAAFLVSKEASYITGTTLFVDGGM    250

BSNT_00502___    251 TLYPSQLE-    258
                     ||||||:. 
BPUM_0257___y    251 TLYPSQIND    259


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