Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00543 and BPUM_0278
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence pep-align/BSNT_00543.1.24716.seq
# -bsequence pep-align/BPUM_0278___lctP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00543-BPUM_0278___lctP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00543-BPUM_0278___lctP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00543
# 2: BPUM_0278___lctP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 285/541 (52.7%)
# Similarity: 343/541 (63.4%)
# Gaps: 136/541 (25.1%)
# Score: 1476.0
#
#
#=======================================
BSNT_00543 0 -------------------------------------------------- 0
BPUM_0278___l 1 MWQQIYNPFGNEFVSALVAMLPILFFLLALTVFKLKGVLAACFTLIVSFV 50
BSNT_00543 0 -------------------------------------------------- 0
BPUM_0278___l 51 TAVFFFHMPIEKALSAVLLGISNGLWPIGYIVIMAVWLYKIAVKSGKFDV 100
BSNT_00543 1 -----------------------------------MVFRLAALLVELGFK 15
.:...||||.|||||
BPUM_0278___l 101 IRSSIAGISQDQRLQLLLIGFSFNAFLEGAAGFGVPIAISAALLTELGFK 150
BSNT_00543 16 PLKAAALCLIANAASGAFGAIGIPVITGAQIGNLSALELSRTLMWTLPMI 65
|||||.||||||||||||||:|||||||||:||::.|.||:||::|:|.|
BPUM_0278___l 151 PLKAAMLCLIANAASGAFGAVGIPVITGAQMGNMTPLALSQTLVFTIPFI 200
BSNT_00543 66 SFLIPFLLVFLLDRMKGIKQTWPALLVVSGGYTAVQTLTMAVLGPELANI 115
||.|||||:.::|..||||:|.||||||||.|..:|.:||..:|||||||
BPUM_0278___l 201 SFCIPFLLILIVDGFKGIKETLPALLVVSGSYAILQAVTMVTMGPELANI 250
BSNT_00543 116 LAALFSMGGLALFLRKWQPKEIYREEGAGDAGEKKAYRAADIAKAWSPFY 165
::||.|||.|||||||||||.|||||||....:|:.||..::.|||||||
BPUM_0278___l 251 ISALASMGILALFLRKWQPKHIYREEGAPAVEQKQTYRGVEVLKAWSPFY 300
BSNT_00543 166 ILTAAITIWSLPAFKALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSA 215
||||.||:||||||||||..||.|..:|:|.|||||||||:|:||||.:|
BPUM_0278___l 301 ILTAVITVWSLPAFKALFAVGGPLNWTTILVKMPFLHQQIVKLPPIAQTA 350
BSNT_00543 216 MPLDAVFKVDLLSATGTSILAAVIVTGLFSKNFSCRDAFASLKETGKELW 265
.|:||:||:|::|||||:||.||::|||||::.:.::..|.||.:.||||
BPUM_0278___l 351 TPIDAIFKIDVISATGTAILIAVMLTGLFSRHITLKEGAACLKASVKELW 400
BSNT_00543 266 VPIMTICFVMGFANLANFAGLSSSIGLALAKTGDLFPFVSPVLGWIGVFI 315
||::|||||||||||||||||||:|||||||||||||.||||||||||||
BPUM_0278___l 401 VPVLTICFVMGFANLANFAGLSSAIGLALAKTGDLFPLVSPVLGWIGVFI 450
BSNT_00543 316 TGSVVSNNALFGHLQVVTGAQIGAGSDLLLAANTAGGVMAKLVSPQSIAI 365
||||||||||||:||.||.:|||:.:.||:.|||.|||||||:|||||||
BPUM_0278___l 451 TGSVVSNNALFGNLQAVTASQIGSQAGLLIGANTTGGVMAKLISPQSIAI 500
BSNT_00543 366 AAAAVGQTGKESKLFKRTVAYSLILLLIICIWMFILARLGV 406
|.||||:|||||:||::||.||.|||.|:|:|.||||:..
BPUM_0278___l 501 ATAAVGETGKESELFQKTVKYSFILLGIVCVWTFILAQFV- 540
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