Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00551 and BPUM_0288
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:21
# Commandline: needle
# -asequence pep-align/BSNT_00551.1.24716.seq
# -bsequence pep-align/BPUM_0288___ycgI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00551-BPUM_0288___ycgI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00551-BPUM_0288___ycgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00551
# 2: BPUM_0288___ycgI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 101/200 (50.5%)
# Similarity: 119/200 (59.5%)
# Gaps: 30/200 (15.0%)
# Score: 509.5
#
#
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BSNT_00551 1 MTQQYIVEPKKGLGLKLKKGQILKVVDVEGQQVADFVAYHAKDFYEHLDQ 50
|..:|::.||..||.:|.|||.::|||||||||||.:|||.|||||..||
BPUM_0288___y 1 MNGEYVILPKGRLGFRLGKGQCMRVVDVEGQQVADVMAYHEKDFYEKFDQ 50
BSNT_00551 51 GATIDANHSIHVKVNDHLYSNLYKPMLTLIEDTVGKHDLLLPACRPDMNR 100
|||:|:..|..||..|.|||||||||.|:|||||..|||.:||||.:|.:
BPUM_0288___y 51 GATMDSLFSSKVKKGDKLYSNLYKPMFTVIEDTVECHDLYMPACRQEMYQ 100
BSNT_00551 101 LLYGKQKDEFQDTCYDNMNRALEQFGVPKPHMHYPFAIFMNTVLDEKGNL 150
||||:...|...|||||:..|.|.||:||..|:|||..|||||:||||.|
BPUM_0288___y 101 LLYGRTHLEVMHTCYDNLRNAFEPFGIPKEDMYYPFNAFMNTVIDEKGKL 150
BSNT_00551 151 SVETPLSNAGDGFNCRVFFLPD---------------------------- 172
|||.|.|..||....|... |
BPUM_0288___y 151 SVELPKSLPGDYIRLRAEM--DLIVAVSACPADIGKCNGASCTSIRVEID 198
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