Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00631 and BPUM_0325

See DNA alignment / Visit BSNT_00631 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:25
# Commandline: needle
#    -asequence pep-align/BSNT_00631___ycxC.1.24716.seq
#    -bsequence pep-align/BPUM_0325___ycxC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00631___ycxC-BPUM_0325___ycxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00631___ycxC-BPUM_0325___ycxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00631___ycxC
# 2: BPUM_0325___ycxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     165/314 (52.5%)
# Similarity:   232/314 (73.9%)
# Gaps:          12/314 ( 3.8%)
# Score: 848.5
# 
#
#=======================================

BSNT_00631___      1 MVKHQQAPAYIAAILYSFIIGLSFLFVKIALQTAEPFDILAHRFTIAFAA     50
                      :...:..||.|||.|:.|||.|||||||||::|.|.|:||||||::|||
BPUM_0325___y      1 -MDISKQKAYAAAIGYATIIGFSFLFVKIALESANPIDLLAHRFTVSFAA     49

BSNT_00631___     51 ATV--PILFGWVKLSIRVKDVIAILPLALLYPALFFSFQAFGLVYSSSSE     98
                     |.:  |.|...::|||:.:|::.|:|.:||||.|||:||.:||:|:||||
BPUM_0325___y     50 ALLLFPFLRKKIRLSIQWRDLLYIVPFSLLYPVLFFAFQVWGLMYTSSSE     99

BSNT_00631___     99 AGIIQAAIPIFTMVFAAYVLKERPTWTQKGFTVLSVAGVMFIFVMKGVDV    148
                     ||||||.|||.|||.||:.||||.||.|..||:|||.|||.:|||||:||
BPUM_0325___y    100 AGIIQATIPILTMVLAAWFLKERATWIQVLFTILSVCGVMLLFVMKGIDV    149

BSNT_00631___    149 ESASLKGSLLILLSALSSAMYNTAARKMTQRFKLTELTYIMSAIGFVVFN    198
                     :.:.:.|.:|||||||||:.|:..||.:|:||.:.|||::|:..||:.||
BPUM_0325___y    150 KHSHMIGYVLILLSALSSSAYSVFARVITRRFHVIELTFVMTFFGFIFFN    199

BSNT_00631___    199 AIALVRHGAAGTVGTYFLPFREPGFVLAIVYLGVLSSLVTSFLSNYTLSR    248
                     |.||:||...||...:|.||.:|.||.::::||:||||:|::||||.||:
BPUM_0325___y    200 AAALIRHSVNGTTLQFFSPFTQPSFVWSMLFLGILSSLLTAYLSNYALSQ    249

BSNT_00631___    249 IEAFKMSAFNHVSTIVTMIAGVMILNESLAWYHLAGAVCIMIGVVGSNIN    298
                     :||.|:|.||::|..:|:.|||:||:|::.||||.|.|.::.||:|.|:.
BPUM_0325___y    250 LEAAKVSIFNNLSAFITVAAGVLILHETIDWYHLIGGVLVIGGVIGGNVV    299

BSNT_00631___    299 LEKKTKRPGMPAKK    312
                     .::.:         
BPUM_0325___y    300 KKRNS---------    304


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