Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00656 and BPUM_0344

See DNA alignment / Visit BSNT_00656 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:26
# Commandline: needle
#    -asequence pep-align/BSNT_00656___yclG.1.24716.seq
#    -bsequence pep-align/BPUM_0344___yclG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00656___yclG-BPUM_0344___yclG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00656___yclG-BPUM_0344___yclG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00656___yclG
# 2: BPUM_0344___yclG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 605
# Identity:     277/605 (45.8%)
# Similarity:   382/605 (63.1%)
# Gaps:          24/605 ( 4.0%)
# Score: 1406.5
# 
#
#=======================================

BSNT_00656___      1 ----------------MAEFILNAADFGVPGDGKTDSTERINQCLSTAVS     34
                                     :.:.::|..||||..|||||.|.::|:||....:
BPUM_0344___y      1 MCEKEEFRLGELNESDLKKPVVNVQDFGVVADGKTDCTAKLNECLEWTKA     50

BSNT_00656___     35 KGYHTVWFPKGTYLIDATLGGDLNQRFRNAGIIVPGNLEIMMDPECIMKV     84
                     :||..||.|.|||:|||...||....||.|||.||.::.|.|.|:.::||
BPUM_0344___y     51 QGYSHVWLPSGTYVIDAVYRGDRFFPFRGAGIRVPSHMTIEMAPDAVIKV    100

BSNT_00656___     85 IPNSSWGYSAFYVGKQENITISGGQIIGERDEHTYVS-AGIRSTHEWGFG    133
                     |||.||||:|||:||.:::||.||:|.|:|.||.|.| ...|.|||||||
BPUM_0344___y    101 IPNDSWGYAAFYIGKVQHVTIRGGRIEGDRHEHVYKSLPPERKTHEWGFG    150

BSNT_00656___    134 ICIEGCSNVLIDDVKISDFTGDGIIVSPRGLKTN-QDYRTSEQIIIRRCE    182
                     |||||.|:|.::.|:|.:.|||||||||.||.:. :.|..:..|.|..|.
BPUM_0344___y    151 ICIEGASDVEVNRVQIKNCTGDGIIVSPHGLLSQVETYSPASSIHISGCH    200

BSNT_00656___    183 VRRSRRNNISITGCDMVTVEECLIEDAGTGNGTAPKFGIDIEGYGEGDVD    232
                     |..||||||||||||.|.||:||:|.||. ||..|:.|||||||||..|:
BPUM_0344___y    201 VTDSRRNNISITGCDGVIVEDCLLERAGV-NGVEPRMGIDIEGYGENAVN    249

BSNT_00656___    233 YEEPINVSIRNNHFVGNVSSSVTNFNGYGILIEGNHSDNTISYGYGTQTV    282
                     .|||:|:.||||...|..:||:.||||||::|||||:|::||||:.|:|:
BPUM_0344___y    250 MEEPLNIQIRNNIVRGGAASSIYNFNGYGVIIEGNHTDSSISYGFATETI    299

BSNT_00656___    283 IKGNILRRPEDAAAAPRVGITGLGVSQGKETSDAVIAGNLITGFSTGIDV    332
                     |..|::|..  .....:.|||.||||.|:..::.:|.||:|.||..||||
BPUM_0344___y    300 IANNLIRAV--GGGVTKAGITSLGVSLGQTENNVIIIGNMIEGFEKGIDV    347

BSNT_00656___    333 RGKSVLVTNNKISNFENTGILVYQSSDVKVDGNQIQNGLSETRRSIGLRA    382
                     ||.||.:|.||||.||:..:.||.::.:.::||.|::|.:...||..||.
BPUM_0344___y    348 RGDSVHITGNKISLFEDAALSVYMANRILIEGNHIESGTNTGLRSAALRI    397

BSNT_00656___    383 VLSDDIAFLNNCLIQVVDGVNVSGGNMIIKDNLLRKFSRGIWIAQGNAVI    432
                     ..||.:.|.||.:..|:||..|.|.|::|:.|..::||||||:.:|.|.|
BPUM_0344___y    398 YQSDSVVFSNNTIYSVIDGAMVRGTNILIQHNQFKEFSRGIWVQEGEAGI    447

BSNT_00656___    433 EGNILNPDAFEAVPESYSVSVTNNAGAIIKNNTFKEFKNYPIYCSTSAKT    482
                     .||....:..:.:..||::|||.||.|.|.:|.||.::||.:|.:|:...
BPUM_0344___y    448 NGNHFIQEGHQELGSSYTISVTGNAKAFIWHNRFKHYQNYAVYSNTTGPL    497

BSNT_00656___    483 SIIGNHLERSPLLVTIYISAGVHEIFDNTISVNRTAGNPIVIYINGSAGS    532
                     .|..|..|.|.|.|.:||..|..:|.||...:||:.|.|..|:|:.:|.:
BPUM_0344___y    498 EIKDNSFEESSLYVVMYIKNGSPQIGDNRFYLNRSFGQPTAIFIDQAASA    547

BSNT_00656___    533 IVSGNTINNLSADTATAIQTTTSTNSKIIGNRIFKGTINKHSSDTIDGNM    582
                     .|..|.|.|||...|.|::|.:||:|.|..|.:.:..:..|::|.|.||:
BPUM_0344___y    548 RVLRNNIINLSPQKAIAVRTISSTHSVIAHNMLERSQLATHTTDRIIGNI    597

BSNT_00656___    583 IV---    584
                     .:   
BPUM_0344___y    598 EIDTP    602


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