Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00666 and BPUM_0353

See DNA alignment / Visit BSNT_00666 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:26
# Commandline: needle
#    -asequence pep-align/BSNT_00666.1.24716.seq
#    -bsequence pep-align/BPUM_0353.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00666-BPUM_0353.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00666-BPUM_0353.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00666
# 2: BPUM_0353
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     170/290 (58.6%)
# Similarity:   198/290 (68.3%)
# Gaps:          64/290 (22.1%)
# Score: 896.0
# 
#
#=======================================

BSNT_00666         1 MDKTASGARPLADKLIVVQRYEKNMNNLFLVDEIKTNNCETQNLLFKMVL     50
                                                                       
BPUM_0353          0 --------------------------------------------------      0

BSNT_00666        51 LYKKASKQPEDIMKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQ    100
                                 |||||||||.||||||||||.:|||:|||||||.:|..
BPUM_0353          1 ------------MKILMIEDNQSVCTMTEMFFQREGFQAEFVHDGQDGLN     38

BSNT_00666       101 RF-TEENWDLIILDIMLPSMDGVTICRKIRETSTVPIIMLTAKDTESDQV    149
                     || .|::|||:|||||||||||:|||:|:|:.|.|||||||||:||||||
BPUM_0353         39 RFKQEDDWDLLILDIMLPSMDGLTICQKVRQISDVPIIMLTAKETESDQV     88

BSNT_00666       150 IGFEMGADDYVTKPFSPLTLVARIKAVIRRYKATGKAVIDEDMIETECFT    199
                     :||::|||||||||||||||:||||||.||:..|.....|| .:.|..|.
BPUM_0353         89 LGFDLGADDYVTKPFSPLTLMARIKAVKRRFTQTTIQKEDE-RLATAHFL    137

BSNT_00666       200 INKKTREVLLNGEPVENLTPKEFDLLYYLVQNPRQVFSREQLLEQVWGYQ    249
                     ::||||||.|:|||:|||||||:|||.:.:|:|||||||||||||:||||
BPUM_0353        138 LDKKTREVFLDGEPIENLTPKEYDLLCFFIQHPRQVFSREQLLEQIWGYQ    187

BSNT_00666       250 FYGDERTVDVHIKRLRKKLASEDKPFLYTVWGVGYKFDED    289
                     ||||||||||||||||:|:....|||||||||||||||||
BPUM_0353        188 FYGDERTVDVHIKRLRQKIGDGPKPFLYTVWGVGYKFDED    227


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