Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00667 and BPUM_0354
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:26
# Commandline: needle
# -asequence pep-align/BSNT_00667___yclK.1.24716.seq
# -bsequence pep-align/BPUM_0354.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00667___yclK-BPUM_0354.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00667___yclK-BPUM_0354.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00667___yclK
# 2: BPUM_0354
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 279/479 (58.2%)
# Similarity: 364/479 (76.0%)
# Gaps: 11/479 ( 2.3%)
# Score: 1417.0
#
#
#=======================================
BSNT_00667___ 1 MKIKYLYQLLLSHISILILAFVIIISLFSHFVKEFAYQNKVEELTSYAVQ 50
|||||.||||:||:.:|::|.:||.:|.|||||:.||||||:|:.||..:
BPUM_0354 1 MKIKYFYQLLMSHLGLLLIAIIIISTLMSHFVKDIAYQNKVDEMKSYGNE 50
BSNT_00667___ 51 IANEF-QAGQVDMR-RLYPYQDMLSTRKTQFIIFNEEQQPYFLPEGFHHP 98
|...| |..:.:|. ||.|::|:||||:.:|.:|:|:.. .|.:....|
BPUM_0354 51 ILQNFQQLPKAEMNFRLRPFEDILSTRQIRFFVFDEKGN--VLTQQQEMP 98
BSNT_00667___ 99 PREQ-LKKSEWNKLKKGQTVMI-RADG-RFDDEVSLVAQPIFVQNEFKGA 145
|.|. |.|..|.||.||:.::: |:|. |.|.|.||||.|:....:.||.
BPUM_0354 99 PHEALLTKDLWTKLAKGEDIIVKRSDSRRLDQEASLVALPVIEDGKLKGG 148
BSNT_00667___ 146 VLLISPISGVEQMVNQVNLYMFYAVISTLVITILVSWLLSKFHVKRIQKL 195
|:||:||.|.|:::.|:|.|::..|...|.||.::|..||||||.||:||
BPUM_0354 149 VVLIAPIQGAEELIAQMNRYLYIIVFVALTITFILSLFLSKFHVNRIKKL 198
BSNT_00667___ 196 REATDKVASGDYDIHLENSYGDEIGVLASDFNIMAKKLKQSRDEIERLEK 245
||||:|:|.|||:|||||.:.||||.|..|||:||.:|::||:||:||||
BPUM_0354 199 REATEKIAHGDYNIHLENKHLDEIGTLGEDFNMMANRLQRSREEIDRLEK 248
BSNT_00667___ 246 RRRQFIADVSHELKTPLTTINGLVEGLNSHTIPEDKKDKCFSLISEETKR 295
||||||||||||||||||||.||||.||:..:|.::|:||::||::||||
BPUM_0354 249 RRRQFIADVSHELKTPLTTIRGLVEWLNTADVPAEEKEKCYALITDETKR 298
BSNT_00667___ 296 MLRLVKENLDYEKIRSQQITLNKLDVPLIEVFEIVKEHLQQQAEEKQNKL 345
|||||.||:|||||||.||||.|...|||:.||::||.|.:.||||.|:|
BPUM_0354 299 MLRLVNENMDYEKIRSNQITLQKFHYPLIDTFEVIKEQLNRMAEEKNNQL 348
BSNT_00667___ 346 MIQVEDHVIVHADYDRFIQILVNITKNSIQFTQNGDIWLRGMEGYKETII 395
:::|.....|:|||||.||||||||||:||||:.|.|.|||.|...||||
BPUM_0354 349 IVEVNPDQKVYADYDRLIQILVNITKNAIQFTEGGRIVLRGKEEDGETII 398
BSNT_00667___ 396 EIEDTGIGIPKEDIEHIWERFYKADISRTNTAYGEYGLGLSIVRQLVEMH 445
|:||||:||..|:::||||||||||||||.|.|||||||||||:|||::|
BPUM_0354 399 EVEDTGVGIAPEEVKHIWERFYKADISRTTTPYGEYGLGLSIVKQLVDLH 448
BSNT_00667___ 446 QGTVEIKSEEGKGTKFIIRLPLTAKQQ-- 472
:|.:::|||:.|||.|.|||||: ||
BPUM_0354 449 EGQIDLKSEKYKGTTFTIRLPLS--QQKG 475
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