Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00701 and BPUM_0399
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:28
# Commandline: needle
# -asequence pep-align/BSNT_00701___ycsA.1.24716.seq
# -bsequence pep-align/BPUM_0399___ycsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00701___ycsA-BPUM_0399___ycsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00701___ycsA-BPUM_0399___ycsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00701___ycsA
# 2: BPUM_0399___ycsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 251/352 (71.3%)
# Similarity: 294/352 (83.5%)
# Gaps: 1/352 ( 0.3%)
# Score: 1356.0
#
#
#=======================================
BSNT_00701___ 1 MKQFEIAAIPGYGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYY 50
||...||||||.|||||||..|.:||...:||||||||:|..|||||:||
BPUM_0399___y 1 MKHVSIAAIPGDGVGKEVVPEAIRVLKAVSEVHGGLSFTFQDFPWSCEYY 50
BSNT_00701___ 51 LEHGKMMPEDGIHTLTQFEAVFLGAVGNPKLVPDHISLWGLLLKIRRELE 100
||||:|||:||:..|..|:::||||||:..|||||:||||||:|||||.|
BPUM_0399___y 51 LEHGEMMPKDGLDQLKAFDSIFLGAVGDANLVPDHVSLWGLLIKIRREFE 100
BSNT_00701___ 101 LSINMRPAKQMAGITSPLLHPNDFDFVVIRENSEGEYSEVGGRIHRGDDE 150
..||:|||||:.||.|||..|.|||.:|:|||.||||||:||||::|:|:
BPUM_0399___y 101 QVINVRPAKQLNGIRSPLSQPKDFDLLVVRENGEGEYSEIGGRIYQGEDQ 150
BSNT_00701___ 151 IAIQNAVFTRKATERVMRFAFELAKKRRSHVTSATKSNGIYHAMPFWDEV 200
:|:|||||:||.|||.|||||:||:|||.|||||||||||.|.|||||||
BPUM_0399___y 151 LAVQNAVFSRKGTERAMRFAFQLAEKRRKHVTSATKSNGIVHTMPFWDEV 200
BSNT_00701___ 201 FQQTAADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISS 250
||..|.||..:...|||||||:||||||||.||||||||||||||||:.:
BPUM_0399___y 201 FQDVAKDYPEVTADSQHIDALSAFFVTRPEKFDVIVASNLFGDILTDLGA 250
BSNT_00701___ 251 SLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAK 300
::|||||:||:||||.:|||||||||||||||||||:|:|||||||||||
BPUM_0399___y 251 AIMGSIGVAPAANINVNGKYPSMFEPVHGSAPDIAGKGIANPIGQIWTAK 300
BSNT_00701___ 301 LMLDHFGEEELGAKILDVMEQVTADGIKTRDIGGQSTTAEVTDEICSRLR 350
||||||||||||..:|:.:|.|||||..|.||||...|.|||:||..||:
BPUM_0399___y 301 LMLDHFGEEELGTHLLETIESVTADGFLTADIGGAYQTQEVTNEIIKRLK 350
BSNT_00701___ 351 KL 352
|
BPUM_0399___y 351 K- 351
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